Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3742 104 2e-17 seq9089 98.7 1e-15 seq4379 98.7 1e-15 seq4762 93.3 4e-14 >seq3742 Length=77992 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| || || || ||||||||||| | |||| | || || ||||| Sbjct 32995 GTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 32936 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || ||||| |||| ||||||||| || || || ||||| ||||| ||||| || || Sbjct 32935 CTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 32876 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||| | || || |||||||| ||||| || || || Sbjct 32875 GGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGGTCTTGCCTGT 32816 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721 | || || ||||| || ||||| ||| ||| Sbjct 32815 CAGGGTCTTGACGAAGATCTGCATCTTGGTTT 32784 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| || || || ||||||||||| | |||| | || || ||||| Sbjct 33223 GTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 33164 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || |||| ||||||||| || || || ||||| ||||| ||||| ||||| Sbjct 33163 CTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATTTT 33104 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||| | || || || ||||| ||||| ||||| || Sbjct 33103 GGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTACCTGT 33044 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 33043 CAGGGTCTTGACGAAGATCTGCAT 33020 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | || ||||| || ||||| || || || ||||||||||| Sbjct 33474 CCTCCACGCAGACGGAGAACCAGGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 33415 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || |||| ||||||||| || || || Sbjct 33414 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGG 33355 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| ||||| || || ||||| || | ||||| | || || Sbjct 33354 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 33295 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || |||||||| || || || || || ||||| || ||||| Sbjct 33294 TCAAGGGTGATGGTTTTGCCTGTCAAGGTCTTGACGAAGATCTGCAT 33248 >seq9089 Length=72386 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560 || ||| ||||| |||||||| ||||| || |||||||||||| | |||| | ||| Sbjct 52154 CAGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 52095 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 || ||||| ||||| ||||| |||| | |||||| || ||||| |||||||| || || Sbjct 52094 CTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTC 52035 Query 134621 TTGAATTTT 134629 || || || Sbjct 52034 CTGGATCTT 52026 >seq4379 Length=69586 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| || || || ||||||||||| | |||| | || || ||||| Sbjct 40098 GTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 40157 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || |||| ||||||||| || || || ||||| ||||| ||||| || || Sbjct 40158 CTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 40217 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||| | || || |||||||| ||||| || || || Sbjct 40218 GGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCGAGAGTGATGGTCTTGCCTGT 40277 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721 | || || ||||| || ||||| ||| ||| Sbjct 40278 CAGGGTCTTGACGAAGATCTGCATCTTGGTTT 40309 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| || || || ||||||||||| | |||| | || || ||||| Sbjct 49721 GTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 49780 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || |||| ||||||||| || || || ||||| ||||| ||||| || || Sbjct 49781 CTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 49840 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 |||||| || | ||||| | || || || ||||| ||||| || || || Sbjct 49841 GGCTTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTTGCCTGT 49900 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721 | || || ||||| || ||||| ||| ||| Sbjct 49901 CAGGGTCTTGACGAAGATCTGCATCTTGGTTT 49932 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 134518 TGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTG 134577 |||| || || || ||||||||||| | |||| | || || ||||| || || | Sbjct 39650 TGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGG 39709 Query 134578 CAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGA 134637 | || |||| ||||||||| || || || ||||| ||||| ||||| || || ||||| Sbjct 39710 CGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCTTTGA 39769 Query 134638 CCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTT 134697 | || | ||||| | || || || ||||||||||| ||||| || | || | Sbjct 39770 CATTCTCGATGGTGTCACTTGGCTCGACCTCAAGAGTAATGGTCTTACCCGTCAGGGTCT 39829 Query 134698 TAACGAAAATTTGCAT 134713 | ||||| || ||||| Sbjct 39830 TGACGAAGATCTGCAT 39845 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | || | ||| || ||||| || || || ||||||||||| Sbjct 39063 CCTCCACGCAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 39122 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || |||| ||||||||| || || || Sbjct 39123 AGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGG 39182 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||| ||||| || || ||||| || | ||||| | || || Sbjct 39183 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 39242 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| || || || | || || ||||| || ||||| Sbjct 39243 TCAAGAGTGATGGTCTTGCCTGTCAGGGTCTTGACGAAGATCTGCAT 39289 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| || || || ||||||||||| | |||| | || || ||||| Sbjct 39870 GTGGAGTGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTG 39929 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 | | |||||||||| | ||||||| || || || ||||| || || ||||| || || Sbjct 39930 CATTACGGCAAAAATCAGATGCTGCTGGTCTGGTGGGATGCCCTCGTTGTCTTGGATCTT 39989 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| | | ||||| | || || || || |||||||| ||||| || Sbjct 39990 GGCCTTGACATTCTTGATGGTGTCACTTGGCTCGACCTCAAGGGTAATGGTCTTACCCGT 40049 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| |||||||| Sbjct 40050 CAAGGTCTTGACGAAGATTTGCAT 40073 >seq4762 Length=92317 Score = 93.3 bits (102), Expect = 4e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTC 134560 || ||| ||||| |||||||| ||||| || |||||||||||| | |||| | ||| Sbjct 80949 CAGCACCAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTC 80890 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 || ||||| ||||| || || |||| | |||||| || ||||| |||||||| || || Sbjct 80889 CTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGCGGGATGCCTTCCTTGTC 80830 Query 134621 TTGAATTTT 134629 || || || Sbjct 80829 CTGGATCTT 80821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505018195101160