Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_028105.1 Length=35159 Score E Sequences producing significant alignments: (Bits) Value seq59402 165 2e-36 >seq59402 Length=222 Score = 165 bits (182), Expect = 2e-36 Identities = 165/209 (79%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 6462 CGGCCAGCGCGCGCTCGTAGGGATTGAGCGGCGGTCCCCAGGGCATGGGATGGGTAAGGG 6521 |||| |||||||||||||| || ||||| || || ||||| |||||||| ||| | || | Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGG-GGACCCCATGGCATGGGGTGG-TGAGCG 58 Query 6522 CCGAGGCATACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCCTCCAGCACGCCGATGT 6581 | ||||| ||||||||||| |||||||| |||||||||||||| || | || | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6582 AAGTGGGGTAGCAGCGGCCGCCGCGGATGCTGGCGCGTACGTAATCGTACATCTCGTGCG 6641 | || || ||||| | | |||||||||||||||| ||||||||||| | ||||||| Sbjct 119 ATGTAGG-TAGCATCTCCA--CGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6642 AGGGGGCCAGCATGTCGGGTCCCAGGTTG 6670 |||| || || | |||||| || |||||| Sbjct 176 AGGGAGCGAGGAGGTCGGGACCGAGGTTG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112306879888566