Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_028107.1 Length=34064 Score E Sequences producing significant alignments: (Bits) Value seq59402 113 1e-20 >seq59402 Length=222 Score = 113 bits (124), Expect = 1e-20 Identities = 146/197 (74%), Gaps = 5/197 (3%) Strand=Plus/Plus Query 6162 CGGCCAGAGCCCTCTCGTACGGATTAAGGGGAGGACCCCAGGGCATGGGGTGAGTAAGGG 6221 |||| || || | |||||| || || || || |||||||| ||||||||||| || || | Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGG-GGACCCCATGGCATGGGGTG-GTGAGCG 58 Query 6222 CAGAAGCGTACATGCCGCAAATGTCGTACACATAAAGAGGCTGGCGTAGAACGCCGATGT 6281 | || ||||||||||||||||||||||| || || || |||| | || | || | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6282 AAGTAGGATAGCAGCGCCCGCCCCGAATGCTGGCCCTGACGTAATCGTACATCTCATGGG 6341 | ||||| ||||| | || | || |||||||| | ||||||||||| | || || | Sbjct 119 ATGTAGG-TAGCATCTCC--ACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6342 ACGGGGCCAAGAGGCCG 6358 | || || | |||| || Sbjct 176 AGGGAGCGAGGAGGTCG 192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108805384103196