Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq503 150 2e-31 >seq503 Length=134583 Score = 150 bits (166), Expect = 2e-31 Identities = 211/296 (71%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 4809 GGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATA 4868 |||||| || || ||||| || | | ||| |||||||| || || || || || || Sbjct 11091 GGGTCTCTGATGTAGGTGTCGATCAACAAGCTGTACATTTCCGAGTGAATGTTCTCCATG 11150 Query 4869 GCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTT 4928 | | |||||| ||||||||||||| || || ||| ||||| || | | ||| | Sbjct 11151 GTGAACTGAAACCCGTAAAAGCATCGCGCCTCAAGTACCTGAACCTCTTGAGTAAAACGC 11210 Query 4929 TCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGAT 4988 | | | |||||||||||| || ||||| ||||| || || || |||||||| ||||| Sbjct 11211 TGAAGGAGGTTTTCGTTTACAATGCCGTCGCTGGCCGCGAAGAAAGCCAAAACGTGAGAG 11270 Query 4989 ATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCA 5048 || || | || || |||| || || |||||| || | || || | | |||| Sbjct 11271 ATGAATTTTCTCTCCTCCCGCTTGAGAGATTCCCAGTGTGGTAGGTCCTTCGAGAGATCA 11330 Query 5049 ACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATC 5104 |||||||| || ||||| || || |||| ||||| |||||||| |||||||||| Sbjct 11331 ACTTCTTCGACCGTCCAGAATGAAGCTTTTGCTTTCTTGTACATTAACCAAATATC 11386 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || || | ||||||||| || ||||||||||| || || ||||| || || | ||||| Sbjct 10721 TCATCGCGGCTAATCAGCTCATTAGAAAACGTCAAGCCAGGCATCAACCCACGTTTTTTC 10780 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 |||||||| || | ||| || || || || ||||| || || || || |||||||| || Sbjct 10781 AGCCAAAAGATGGAGGCGAAAGATCCCGAGAAGAAAATCCCCTCCACCGCGGCAAAGGCC 10840 Query 4692 ACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCT 4751 || | || ||| | | | | || |||||||| |||| ||||||| ||| Sbjct 10841 ACGACTCTCTCACCGTAGGTGGACGTTTCCGAATTAATCCAGTTTAGCGCCCAGTCAGCC 10900 Query 4752 TTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 |||| || ||||| || | || | || |||||||| || Sbjct 10901 TTTTGTTTGACGCAAGGTAGCGTCTCAATGGCGTTAAACAA 10941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426736367525939