Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiria_20miniata_20[genbank_20GCA_5F000285935.1_202012-08-13] 60,183 sequences; 811,028,858 total letters Query= NC_030792.1 Length=32690 Score E Sequences producing significant alignments: (Bits) Value seq59402 147 5e-31 >seq59402 Length=222 Score = 147 bits (162), Expect = 5e-31 Identities = 152/194 (78%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 6285 CGGCCACCGCGCGGTCGTATGGGTTGAGCGGGTACCCGGCGGGAAAGGGGTGTGTGAGCG 6344 |||| | |||||| |||||||||||||| ||| |||| || | |||||| ||||||| Sbjct 1 CGGCAAGCGCGCGCTCGTATGGGTTGAGTGGGGACCCCATGGCAT-GGGGTG-GTGAGCG 58 Query 6345 CGCTGGCATACATGCCGCAGATGTCGTAGACGTAGACGGGCTCTGAGAGCACGCCTATGT 6404 || ||| ||||||||||| |||||||| ||||||| ||||||| ||| | || | | Sbjct 59 CGGAGGCGTACATGCCGCAAATGTCGTAAACGTAGAGGGGCTCTCTGAGTATTCCAAGAT 118 Query 6405 AAGTGGGGTAGCATCGGCCGCCGCGGATGCTGGCGCGCACGTACTCGTACATCTCGTGGG 6464 | || ||||||||| | |||||||||||||||||||||| ||||| | ||||| | Sbjct 119 ATGT-AGGTAGCATC--TCCACGCGGATGCTGGCGCGCACGTAATCGTATAGTTCGTGCG 175 Query 6465 ACGGGGCCAGGAGG 6478 | || || |||||| Sbjct 176 AGGGAGCGAGGAGG 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104411726377992