Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2660963 105 7e-18 >seq2660963 Length=245 Score = 105 bits (116), Expect = 7e-18 Identities = 158/223 (71%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| |||| ||||| || || || || || ||||| ||| |||||||||||| |||| Sbjct 237 CCTCATCTCGACTGATCAGCTCATTGGAGAACGTCAAACCGTGCATCTTTCCTCTCTTCT 178 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || || | ||| || ||||| || ||||| || ||||| |||| || || | Sbjct 177 TCAGCCAGAAGATGGAGGCAAAGGACCCCGAGAAGAAAATGCCCTCTACGGCGGCGAAGG 118 Query 17106 CGATTAATCGTTCGGCGTAC---GTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACT 17162 | | | ||| ||| ||||| |||| |||| ||| ||||| ||| |||| | Sbjct 117 CCACAACTCGCTCGCCGTACGTGGTCGAGTCTGAGTT---GATCCAGTTCAATGCCCAGT 61 Query 17163 CGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 | ||||| ||||| | |||| | || || ||||| || || Sbjct 60 CAGCTTTCTGCTTGACGCAAGGTAGGGTCTCAATGGCGTTGAA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498095861131440