Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq103958 89.7 6e-13 seq2830548 86.0 7e-12 >seq103958 Length=1487 Score = 89.7 bits (98), Expect = 6e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 53756 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 53815 || ||||| ||||| || ||||| ||||||||||| || | || ||||| |||||||| Sbjct 662 ATAATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTTACTCTTA 603 Query 53816 TTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG 53867 |||| || |||||||| || || ||| | || ||||| || || |||||| Sbjct 602 CTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGG 551 >seq2830548 Length=329 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 53756 ATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTT 53815 || ||||| || || || ||||| ||||||||||| || | || ||||| |||||||| Sbjct 179 ATGATCTCGGTACACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTTACTCTTG 120 Query 53816 TTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG 53867 |||| || |||||||| || || ||| | || ||||| || || |||||| Sbjct 119 CTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGG 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571409111823840