Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2924339 86.0 5e-12 seq2830548 84.2 2e-11 >seq2924339 Length=450 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 31285 GGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGA 31344 ||||||||||||| | ||||||||||||||||| || || ||||| ||||| ||| |||| Sbjct 205 GGACAAGGAAGGCATCCCGCCCGACCAGCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGA 146 Query 31345 AGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || | ||| || ||||| || || || || || || || ||||| || Sbjct 145 GGATGGGCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCT 86 Query 31405 TAGACTGAGGGGCGG 31419 || ||| ||||||| Sbjct 85 GAGGCTGCGGGGCGG 71 >seq2830548 Length=329 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 ||||||||| | || |||||| | || |||||||| || || || ||||| || || Sbjct 204 CACCTCGTCCGGGCTCGAGTACTCAATGATCTCGGTACACAGGTTACTGCACTTGATGGT 145 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 ||||| || ||||| || || | ||||| | ||||||||| ||||||||||| || Sbjct 144 GCCCAGGTTCTGTTGGTTACTCTTGCTGTTGCAGGCATCCTTGTACAGCATGTACGGGGT 85 Query 23167 GCCCGTCTC 23175 || ||||| Sbjct 84 ACCGGTCTC 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429436063867814