Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2492505 163 4e-36 seq1575217 113 7e-21 seq1675553 104 4e-18 seq1406989 102 1e-17 seq1534507 100 4e-17 seq1919938 98.7 2e-16 seq1587892 98.7 2e-16 seq1556996 98.7 2e-16 seq1796494 96.9 5e-16 seq1575130 96.9 5e-16 seq1488404 96.9 5e-16 seq1469095 95.1 2e-15 seq1714845 93.3 6e-15 seq1500823 93.3 6e-15 seq1321018 93.3 6e-15 seq1316995 93.3 6e-15 seq1291470 93.3 6e-15 seq1521674 86.0 1e-12 seq1404488 82.4 1e-11 seq1543136 80.6 4e-11 seq1389697 80.6 4e-11 >seq2492505 Length=207 Score = 163 bits (180), Expect = 4e-36 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| || |||||||||||||| || || ||||| ||||||||| ||||| Sbjct 207 GGTATCACCAAGCCCGCCATCCGTCGTCTGGCCCGCCGAGGTGGTGTCAAGCGTATCTCT 148 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || ||| |||| || |||| |||| ||| | ||| | ||||| ||| ||| |||| | Sbjct 147 GGTTTGATCTACGAGGAGACCCGTGGTGTCCTTAAGGTTTTCCTTGAGAACGTCATCCGT 88 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 ||||| || ||| ||||||||| || | ||||| |||||| | |||||| | ||| Sbjct 87 GATGCCGTCACCTACTGCGAGCACGCCAAGAGAAAGACCGTCACCGCTATGGATGTTGTC 28 Query 16652 TATGCATTGAAACGTCAAGGCCGTA 16676 || || ||||||| || ||||||| Sbjct 27 TACGCTCTGAAACGCCAGGGCCGTA 3 >seq1575217 Length=127 Score = 113 bits (124), Expect = 7e-21 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 16441 TCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTC 16499 |||||||| | |||| || || |||||||| || ||||||||||| |||||||| |||| Sbjct 127 TCATCGCA-AGGTCTTGCGTGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCGTC 69 Query 16500 TGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATG 16559 ||||||| || ||||| ||||||||| ||||||| || |||| || |||| |||| || Sbjct 68 TGGCTCGCCGAGGTGGTGTCAAGCGTATCTCTGGTCTGATCTACGAGGAGACACGTGGTG 9 Query 16560 T 16560 | Sbjct 8 T 8 >seq1675553 Length=127 Score = 104 bits (114), Expect = 4e-18 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | |||||| || |||||||| |||||||| || |||||||| Sbjct 22 CGCCAAGCGTCACCGAAAGGTTCTTCGTGACAACATCCAGGGAATCACGAAACCAGCTAT 81 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533 ||||| ||||| |||||||| |||||||||||| |||| || Sbjct 82 TCGTCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATCTCCGG 123 >seq1406989 Length=127 Score = 102 bits (112), Expect = 1e-17 Identities = 81/95 (85%), Gaps = 2/95 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||||||||||| | |||| || ||||||||||| || ||||||||||| || | Sbjct 94 CGCCAAGCGTCATCGCA-AGGTCTTGCGTGATAACATCCAGGGTATCACCAAGCCCGCCA 36 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 ||||||||||||| || || ||||| ||||||||| Sbjct 35 TCCGTCGTCTGGCCCGCCGAGGTGGTGTCAAGCGT 1 >seq1534507 Length=127 Score = 100 bits (110), Expect = 4e-17 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||||| |||||||| Sbjct 124 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGTCGTGG 65 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 |||||||||||| |||| || | ||||||| || | || | ||| | ||| | || Sbjct 64 GGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGAAACCCGCGGAGTTCTCAAGGTTTT 5 Query 16573 CCT 16575 ||| Sbjct 4 CCT 2 >seq1919938 Length=143 Score = 98.7 bits (108), Expect = 2e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||||||||||| | | || || |||||||| || ||||||||||| ||||| Sbjct 45 CGCCAAGCGTCATCGCAAGGTTTTGCGTGACAACATCCAGGGCATCACCAAGCCCGCTAT 104 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| |||||||| || || ||||| ||||||||| |||| Sbjct 105 CCGCCGTCTGGCCCGCCGAGGTGGTGTCAAGCGTATCTC 143 >seq1587892 Length=127 Score = 98.7 bits (108), Expect = 2e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | |||||| || |||||||| || ||||| || |||||||| Sbjct 1 CGCCAAGCGTCACCGAAAGGTTCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTAT 60 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 || || ||||| |||||||| |||||||||||| |||| || | ||||||| || Sbjct 61 TCGGCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 117 >seq1556996 Length=127 Score = 98.7 bits (108), Expect = 2e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | |||||| || |||||||| || ||||| || |||||||| Sbjct 126 CGCCAAGCGTCACCGAAAGGTTCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTAT 67 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 | ||| ||||| |||||||| |||||||||||| |||| || | ||||||| || Sbjct 66 TCCTCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 10 >seq1796494 Length=133 Score = 96.9 bits (106), Expect = 5e-16 Identities = 83/100 (83%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||||||||||| | |||| || || |||||||| || ||||||||||| || | Sbjct 99 CGCCAAGCGTCATCGCA-AGGTCTTGCGTGACAACATCCAGGGCATCACCAAGCCCGCAA 41 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| |||||||| || || ||||| ||||||||| |||| Sbjct 40 TCCGCCGTCTGGCCCGCCGAGGTGGTGTCAAGCGTATCTC 1 >seq1575130 Length=127 Score = 96.9 bits (106), Expect = 5e-16 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||||| |||||||| Sbjct 115 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCACGTCGTGG 56 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 |||||||||||| |||| || | ||||||| || Sbjct 55 AGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 20 >seq1488404 Length=127 Score = 96.9 bits (106), Expect = 5e-16 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||||| ||||||| Sbjct 123 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGTCGTGA 64 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 |||||||||||| |||| || | ||||||| || | || | ||| | ||| | || Sbjct 63 AGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGAAACCCGCGGAGTTCTCAAGGTTTT 4 Query 16573 CCT 16575 ||| Sbjct 3 CCT 1 >seq1469095 Length=127 Score = 95.1 bits (104), Expect = 2e-15 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| |||||||| || | |||||| || |||||||| || ||| | || |||||||| Sbjct 110 CGCCAAGCGTCACCGAAAGGTTCTTCGTGACAACATCCAGGGCATCCCGAAACCAGCTAT 51 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533 ||||| ||||| |||||||| |||||||||||| |||| || Sbjct 50 TCGTCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATCTCCGG 9 >seq1714845 Length=129 Score = 93.3 bits (102), Expect = 6e-15 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||||| || ||||| Sbjct 120 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGGCGTGG 61 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 |||||||||||| |||| || | ||||||| || Sbjct 60 AGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 25 >seq1500823 Length=127 Score = 93.3 bits (102), Expect = 6e-15 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 16463 AACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAG 16522 |||||||| || ||||| || |||||||| ||||| ||||| |||||||| ||||||||| Sbjct 2 AACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGTCGTGGAGGAGTCAAG 61 Query 16523 CGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACC 16582 || |||| || | ||||||| || | || | ||| | ||| | ||||| ||| Sbjct 62 CGGATCTCCGGTCTCATCTATGAGGAAACCCGCGGAGTTCTCAAGGTTTTCCTGGAGAAT 121 Query 16583 GTTATC 16588 |||||| Sbjct 122 GTTATC 127 >seq1321018 Length=127 Score = 93.3 bits (102), Expect = 6e-15 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||| | |||||||| Sbjct 15 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGTCCCGTCGTGG 74 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 |||||||||||| |||| || | ||||||| || Sbjct 75 AGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 110 >seq1316995 Length=127 Score = 93.3 bits (102), Expect = 6e-15 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||||| ||||| || Sbjct 7 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGTCGGGG 66 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 |||||||||||| |||| || | ||||||| || Sbjct 67 AGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 102 >seq1291470 Length=127 Score = 93.3 bits (102), Expect = 6e-15 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || |||||||| || ||||| || |||||||| ||||| ||||| |||| ||| Sbjct 120 TCTTCGTGACAACATCCAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGTCATGG 61 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGA 16548 |||||||||||| |||| || | ||||||| || Sbjct 60 AGGAGTCAAGCGTATCTCCGGTCTCATCTATGAGGA 25 >seq1521674 Length=127 Score = 86.0 bits (94), Expect = 1e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 16469 CAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 || || ||||| || |||||||| ||||| ||||| |||||||| |||||||||||| || Sbjct 127 CAGGGCATCACGAAACCAGCTATTCGTCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATC 68 Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 || | | ||||||| || | || | ||| | ||| | ||||| ||| |||||| Sbjct 67 TCCTGTCTCATCTATGAGGAAACCCGCGGAGTTCTCAAGGTTTTCCTGGAGAATGTTATC 8 Query 16589 CATGATG 16595 | |||| Sbjct 7 CGCGATG 1 >seq1404488 Length=127 Score = 82.4 bits (90), Expect = 1e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 16478 ACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTG 16537 || || |||||||| ||||| ||||| |||||||| |||||||||||| |||| || | Sbjct 1 ACGAAACCAGCTATTCGTCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATCTCCGGTCTC 60 Query 16538 GTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCT 16597 || |||| || | || | ||| | ||| | ||||| ||| ||||||| |||||| Sbjct 61 ATCCATGAGGAAACCCGCGGAGTTCTCAAGGTTTTCCTGGAGAATGTTATCCGCGATGCT 120 Query 16598 TTC 16600 || Sbjct 121 GTC 123 >seq1543136 Length=127 Score = 80.6 bits (88), Expect = 4e-11 Identities = 88/117 (75%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 16484 CCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTAT 16543 |||||||| ||||| ||||| |||||||| |||||||||||| |||| || | ||||| Sbjct 1 CCAGCTATTCGTCGGCTGGCCCGTCGTGGAGGAGTCAAGCGTATCTCCGGTCTCATCTAT 60 Query 16544 GAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || | | || | ||| | ||| | ||||| ||| ||||||| |||||| || Sbjct 61 GAGTAAACCCGCGGAGTTCTCAAGGTTTTCCTGGAGAATGTTATCCGCGATGCTGTC 117 >seq1389697 Length=127 Score = 80.6 bits (88), Expect = 4e-11 Identities = 69/83 (83%), Gaps = 2/83 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||||||||||| | |||| || || |||||||| || ||||||||||| || | Sbjct 82 CGCCAAGCGTCATCGCAAAG-TCTTGCGTGACAACATCCAGGGTATCACCAAGCCCGCCA 24 Query 16491 TCCGTCGTCTGGCTCGTCGTGGT 16513 ||||||||||||| || || ||| Sbjct 23 TCCGTCGTCTGGCCCGCCGAGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 76326374405394