Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2924339 105 6e-18 seq1854222 96.9 3e-15 seq2830548 95.1 1e-14 seq103958 95.1 1e-14 >seq2924339 Length=450 Score = 105 bits (116), Expect = 6e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| | |||||| | || | ||| |||||||| || |||||||| ||| Sbjct 71 CCGCCCCGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 130 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 131 AGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGG 190 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 || ||||| ||||| ||| || ||||| | ||| | || ||| ||| ||| Sbjct 191 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTC 246 >seq1854222 Length=138 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| || || || || | ||| ||||| || || |||||||| ||| || |||||| Sbjct 138 ACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCC 79 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||||| |||||||| || ||| |||| | |||||||||||| || ||||| || ||||| Sbjct 78 ATCCTCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTT 19 Query 131139 GTC 131141 ||| Sbjct 18 GTC 16 >seq2830548 Length=329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 145678 GATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCT 145737 |||||||| |||| || || || |||||||| ||||| || || || ||||| || || Sbjct 177 GATCTCGGTACACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTTACTCTTGCT 118 Query 145738 GTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT 145797 |||||| || |||||||| ||||||||||| || |||||| ||| | || |||||| Sbjct 117 GTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGCCTGCACGAT 58 >seq103958 Length=1487 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 145679 ATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTG 145738 ||||| | ||||| || || || |||||||| ||||| || || || ||||| || ||| Sbjct 659 ATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTTACTCTTACTG 600 Query 145739 TTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA 145798 ||||| || |||||||| ||||||||||| || |||||| ||| | || ||||||| Sbjct 599 TTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGCCTGCACGATA 540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454274216766720