Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq2986189 116 4e-21 seq198113 87.8 2e-12 >seq2986189 Length=758 Score = 116 bits (128), Expect = 4e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 93406 CTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGA 93465 |||||| | || ||||| || ||||||||||| || || | || || || || ||| Sbjct 265 CTCCATAACCATCTGGAAGCCATAGAAACATCTTGCCTCAGGAATTTGTACCTCCTGACT 324 Query 93466 AAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATAT 93525 ||| ||||||||||| || ||||||||||||||||| ||||||||| || |||| || Sbjct 325 AAACCTCTCTACGAGGTTCTCATTGACTATACCATCACTTGCTGCAAAGAAGGCCAGGAT 384 Query 93526 ATGCTTTATAAAATGTTTCTCA 93547 ||||| || ||||||| |||| Sbjct 385 GTGCTTGATGAAATGTTGCTCA 406 >seq198113 Length=2368 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 93406 CTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGA 93465 |||||| | | ||||| || ||||| ||||| || || | ||||| || || ||| Sbjct 110 CTCCATAACCACCTGGAAGCCATAGAAGCATCTTGCCTCAGGAATCTGGACCTCCTGACT 51 Query 93466 AAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaa 93513 ||| ||||||||||| || ||||||||||||||||| ||||||||| Sbjct 50 AAACCTCTCTACGAGGTTCTCATTGACTATACCATCACTTGCTGCAAA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535933567411920