Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2924339 145 1e-29 seq1854222 114 2e-20 seq2371163 111 3e-19 seq1834676 107 3e-18 seq129324 107 3e-18 seq1097346 100 5e-16 seq602089 100 5e-16 seq1193320 95.1 2e-14 seq831659 95.1 2e-14 seq824347 95.1 2e-14 seq1540020 91.5 3e-13 seq1385232 91.5 3e-13 seq602088 91.5 3e-13 seq1193319 89.7 9e-13 seq831658 89.7 9e-13 seq430633 89.7 9e-13 seq1302992 86.0 1e-11 seq823516 86.0 1e-11 seq815070 84.2 4e-11 seq815069 84.2 4e-11 >seq2924339 Length=450 Score = 145 bits (160), Expect = 1e-29 Identities = 136/172 (79%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || | || |||| ||| || |||||||| || |||||||| || |||||| Sbjct 71 CCGCCCCGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 130 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||| || | |||||| |||||||| || || | || |||||||| || Sbjct 131 AGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGG 190 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||||||||||||| || ||||| |||||||| |||||||||||| |||| Sbjct 191 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC-GCTG 241 >seq1854222 Length=138 Score = 114 bits (126), Expect = 2e-20 Identities = 104/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| |||||||| || ||||| || || | ||||| || Sbjct 131 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCC 72 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| || || | || ||||| ||||| ||||| || |||||||| Sbjct 71 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGG 12 Query 68373 ATCTTTGCCTT 68383 ||||| ||||| Sbjct 11 ATCTTGGCCTT 1 >seq2371163 Length=190 Score = 111 bits (122), Expect = 3e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || || | || ||||| ||||| ||||| || |||||||| ||||| Sbjct 190 CTTTCCTGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 131 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || ||||| |||||||||||| || || || || | ||||||||||| || || Sbjct 130 GGCTTTGACATTCTCGATGGTGTCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCTGT 71 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 |||||| |||||||| |||||||| Sbjct 70 GAGGGTTTTGACGAAGATCTGCAT 47 >seq1834676 Length=136 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||| ||||| || |||||||| ||||| ||||| || |||||| ||| Sbjct 2 TGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTCTCGATTGTG 61 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || || || || || | ||||||||||| || ||||||||||||||||| |||||| Sbjct 62 TCGCTTGGCTCAACCTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGC 121 Query 68460 AT 68461 || Sbjct 122 AT 123 >seq129324 Length=390 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||| ||||| || |||||||| ||||| ||||| || |||||| ||| Sbjct 144 TGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTTACATTCTCGATTGTG 85 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || || || || || | ||||||||||| || ||||||||||||||||| |||||| Sbjct 84 TCACTTGGCTCGACCTCAAGTGTGATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGC 25 Query 68460 AT 68461 || Sbjct 24 AT 23 >seq1097346 Length=122 Score = 100 bits (110), Expect = 5e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||| ||||| || |||||||| ||||| |||||||| |||||||||| Sbjct 13 TGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTG 72 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || || || || || | ||||||||||| || |||||||||||||| Sbjct 73 TCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTGAC 122 >seq602089 Length=103 Score = 100 bits (110), Expect = 5e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 68357 GCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416 ||| || ||||| || ||||| ||||||||| |||||||||||| || || || || Sbjct 103 GCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTTGGCTCGACCTC 44 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 | |||||||||||| || ||||||||||||||||| |||||| Sbjct 43 AAGGGTGATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGC 1 >seq1193320 Length=124 Score = 95.1 bits (104), Expect = 2e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||| ||||| || ||||| || ||||| ||||| || ||| |||||| Sbjct 8 TGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTTACATTCTCAATGGTG 67 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 || || || || || | ||||||||||| || ||||||||||||||||| ||| Sbjct 68 TCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTGACGAAGATC 124 >seq831659 Length=112 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| |||||||| || ||||| || || | |||||||| Sbjct 5 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCA 64 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCC 68359 | |||||| || ||||| || || | || ||||| ||||| ||||| Sbjct 65 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCC 111 >seq824347 Length=112 Score = 95.1 bits (104), Expect = 2e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| |||||||| || || || || || | |||||||| Sbjct 108 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCA 49 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCC 68359 | |||||| |||||||| || || | || ||||| ||||| ||||| Sbjct 48 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCC 2 >seq1540020 Length=127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| ||||||||| |||||||||||| || || || || | ||| Sbjct 126 TTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTTGGCTCGACCTCAAGAGTG 67 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || ||||||||||||||||| |||||||| Sbjct 66 ATTGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 29 >seq1385232 Length=127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| |||||||| || || || || || | |||||||| Sbjct 17 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCTTCC 76 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTC 68362 | |||||| ||||| || || || | || ||||| ||||| ||||| || Sbjct 77 AGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTC 126 >seq602088 Length=103 Score = 91.5 bits (100), Expect = 3e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 68357 GCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTC 68416 ||| || ||||| || ||||| || |||||| |||||| ||||| || || || || Sbjct 103 GCCCTCTTTGTCCTGGATCTTGGCTTTGACGTTCTCGATTGTGTCACTTGGCTCGACCTC 44 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 | |||||||||||| || ||||||||||||||||| |||||| Sbjct 43 AAGGGTGATGGTTTTGCCTGTGAGGGTCTTGACGAAGATCTGC 1 >seq1193319 Length=124 Score = 89.7 bits (98), Expect = 9e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||| ||||| || ||||| || ||||| ||||| || ||| || ||| Sbjct 8 TGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTTACATTCTCAATTGTG 67 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATC 68456 || || || || || | ||||||||||| || ||||||||||||||||| ||| Sbjct 68 TCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCTGTGAGGGTCTTGACGAAGATC 124 >seq831658 Length=112 Score = 89.7 bits (98), Expect = 9e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| |||||||| || || || || || | |||||||| Sbjct 5 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 64 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCC 68359 | |||||| || ||||| || || | || ||||| ||||| ||||| Sbjct 65 AGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCC 111 >seq430633 Length=574 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || || ||||| || ||||| |||||||| |||||||||||| | | ||||| ||| Sbjct 234 CCCTCTTTGTCCTGTATCTTAGCCTTGACATTCTCGATGGTGTCGGAGGGCTCTACCTCC 175 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || ||||| |||||||| || || |||||||| Sbjct 174 AACGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 131 >seq1302992 Length=127 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| || ||||||| | |||||||||||||||| Sbjct 92 GCCCGGTTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 33 Query 84516 CCCACATCGGGC 84527 |||||||||||| Sbjct 32 CCCACATCGGGC 21 >seq823516 Length=112 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| ||||| ||||| || ||||| || ||||| ||||||||| |||||| ||| Sbjct 8 TGCTGGTCTGGTGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTCTCGATTGTG 67 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444 || || || || || | ||||||||||| || ||||||||| Sbjct 68 TCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCTGTGAGGGTC 112 >seq815070 Length=112 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||||| ||||||||||| |||| ||| |||||||| | |||||| || Sbjct 112 CATGACGCCCGATTTCTGGTACTCGCCGACCCTCTTCTCAAAGAAGTTTGTCTTGCCTTC 53 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 ||||| ||| ||||||||| ||||||||||| || Sbjct 52 TAGGGAGATGTTCTCCATGAAATCAAAGGGGTTTTC 17 >seq815069 Length=112 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||||| ||||||||||| |||| ||| |||||||| | |||||| || Sbjct 112 CATGACGCCCGATTTCTGGTACTCGCCGACCCTCTTCTCAAAGAAGTTCGTCTTGCCTTC 53 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 ||||| ||| ||||||||| ||||||||||| || Sbjct 52 TAGGGAGATGTTCTCCATGAAATCAAAGGGGTTTTC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 886987162031760