Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2986051 114 1e-20 seq2924339 82.4 6e-11 >seq2986051 Length=756 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 480 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 421 Query 115588 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 || ||||||| || ||||||||||| ||| || ||||| Sbjct 420 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 382 Score = 114 bits (126), Expect = 1e-20 Identities = 87/99 (88%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAAC-TGAGTAAGATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||| Sbjct 480 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTGGGTACGATCTAAGGAAC 421 Query 114391 CAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 || ||||||| || ||||||||||| ||| || ||||| Sbjct 420 CATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 382 >seq2924339 Length=450 Score = 82.4 bits (90), Expect = 6e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||||| ||||||||| || || ||| ||||||||| |||||||| || | Sbjct 71 CCGCCCCGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 130 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| | || |||| ||||||||||| || ||||| |||||||| || ||| Sbjct 131 AGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGG 190 Query 34021 ACGCTCTCTTTGTCC 34035 | || || |||||| Sbjct 191 ATGCCTTCCTTGTCC 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 382513554459316