Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2830548 96.9 4e-15 seq103958 95.1 1e-14 seq315344 93.3 5e-14 seq2172454 84.2 3e-11 >seq2830548 Length=329 Score = 96.9 bits (106), Expect = 4e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 |||||| || || || ||||||| || | ||| |||||||||| ||||| ||| || Sbjct 186 GTACTCAATGATCTCGGTACACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 127 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| |||| || ||||||||||| |||||||| || || || |||||||| |||| Sbjct 126 ACTCTTGCTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGC 67 Query 114634 CTTGAGAATAGCCTTCCAGACAT 114656 || | || |||| ||||| || Sbjct 66 CTGCACGATGGCCTGCCAGAGAT 44 >seq103958 Length=1487 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 |||||| ||||| ||||| |||| || | ||| |||||||||| ||||| ||| || Sbjct 669 GTACTCGATAATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 610 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| |||| || ||||||||||| |||||||| || || || |||||||| |||| Sbjct 609 ACTCTTACTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGC 550 Query 114634 CT 114635 || Sbjct 549 CT 548 >seq315344 Length=497 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | ||||| ||||||| | |||| || || |||| ||| || || |||||| Sbjct 312 TAGATGTTACTTGTGTAGGGCTCAATGGACTCGTTATTGCCCAGGATCTGAGCTGTGGAG 371 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || ||||||||||| |||| || || ||||| | ||| || | | |||| || Sbjct 372 GCAGTGGGCATGGGGGCCAGCAGGAGACTGTTCCTGAGCCCGTACTTGGCAATGTCAGCC 431 Query 114062 TTGAGGGCGTCCCAGTCGT 114080 ||||||||| ||||||||| Sbjct 432 TTGAGGGCGGCCCAGTCGT 450 >seq2172454 Length=167 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| || | ||||| ||||||| | |||| || || |||| ||| ||||| |||||| Sbjct 46 TAGATGTTACTGGTGTAGGGCTCAATGGACTCGTTATTGCCCAGGATCTGGGCTGTGGAG 105 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC 114042 || ||||||||||| |||| || || ||||| | ||| || Sbjct 106 GCAGTGGGCATGGGGGCCAGCAGGAGACTGTTCCTGAGCCC 146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574904618630640