Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2172454 105 6e-18 seq315344 98.7 9e-16 >seq2172454 Length=167 Score = 105 bits (116), Expect = 6e-18 Identities = 88/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 95102 TGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAAC 95161 |||||||||||||||| |||||||| || |||||||| ||||| |||||||| | || | Sbjct 124 TGGCCCCCATGCCCACTGCCTCCACAGCCCAGATCCTGGGCAATAACGAGTCCATTGAGC 65 Query 95162 CCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 ||| |||| ||| | |||| | | |||||||| |||||||||||| Sbjct 64 CCTACACCAGTAACATCTACACCCGCAGGGTGCTCTCCGGGGAATTCC 17 >seq315344 Length=497 Score = 98.7 bits (108), Expect = 9e-16 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 95038 CTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTG 95097 ||| ||||||||| || || ||||| || ||| |||| | | ||| || Sbjct 454 CTGCACGACTGGGCCGCCCTCAAGGCTGACATTGCCAAGTACGGGCTCAGGAACAGTCTC 395 Query 95098 CTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTC 95157 || |||||||||||||||| |||||||| || |||||||| ||||| |||||||| | Sbjct 394 CTGCTGGCCCCCATGCCCACTGCCTCCACAGCTCAGATCCTGGGCAATAACGAGTCCATT 335 Query 95158 GAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 || |||| ||| ||| | |||| | | |||||||| | |||||||||| Sbjct 334 GAGCCCTACACAAGTAACATCTACACCCGCAGGGTGCTCTCTGGGGAATTCC 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476131143469680