Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq366117 93.3 4e-14 seq2639706 89.7 5e-13 >seq366117 Length=3063 Score = 93.3 bits (102), Expect = 4e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||||| | ||||||| |||||||||| ||||||||||||||| ||| ||| ||||||||| Sbjct 407 GCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAAT 348 Query 92675 CCCACTCCCGC 92685 || |||||||| Sbjct 347 CCTACTCCCGC 337 >seq2639706 Length=239 Score = 89.7 bits (98), Expect = 5e-13 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 153051 CTGGAGGAGGTGCGTGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACC 153110 ||||||| || || ||| |||| |||||||| || || |||||| | | || || Sbjct 218 CTGGAGGCTGTTCGCGCCCAGGTGGAGGAGATTATTGGTCACGGCACTTCGACGCCGACG 159 Query 153111 GGGCACATCCCGTTCACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCG 153170 || || || || || ||| || ||||| || || |||||| |||||||| || Sbjct 158 GGCCATATTCCCTTTACCCCGCGTGCCAAGAAGGTTCTTGAGCTGAGCCTGCGCGAAGCC 99 Query 153171 CTGCAGCTCGGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAG 153230 || ||| | || ||||| ||||||||||| | ||||| | ||| ||||| ||| Sbjct 98 CTCCAGATGAATCATTCGTACATTGGCACCGAGCACATTCTGCTTGGCCTTATCCGGGAG 39 Query 153231 GGTGAGGGCGTGGGCTGC-CAGGTGCTG 153257 || || ||||| ||||| ||||| ||| Sbjct 38 GGAGAAGGCGT-CGCTGCTCAGGTACTG 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506808450344160