Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2924339 111 4e-19 seq572346 107 4e-18 seq1385232 105 2e-17 seq824347 105 2e-17 seq831657 104 5e-17 seq831658 102 2e-16 seq751460 102 2e-16 seq1854222 96.9 8e-15 seq831659 96.9 8e-15 seq497311 96.9 8e-15 seq125919 96.9 8e-15 seq129324 95.1 3e-14 seq1574934 91.5 3e-13 seq1632298 86.0 1e-11 seq500828 84.2 5e-11 >seq2924339 Length=450 Score = 111 bits (122), Expect = 4e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || ||||| || |||||||| || |||||||| |||| ||||||||| | | || Sbjct 77 CGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 136 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| ||||||||||| ||||||||||| || ||||||||||| || || ||| Sbjct 137 CGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGGATGCCT 196 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 || ||||| ||||| ||| || |||| |||||| Sbjct 197 TCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 237 >seq572346 Length=102 Score = 107 bits (118), Expect = 4e-18 Identities = 79/92 (86%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || ||||| || |||| ||||||||||| | ||| | ||||||||||||||| Sbjct 1 TGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 60 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||||||| |||||||||||||| || Sbjct 61 TTTCCGGCGAAGATCAGACGCTGCTGGTCTGG 92 >seq1385232 Length=127 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||||| || || | |||||| Sbjct 14 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCT 73 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||||||||| ||||| |||||||||||||| || Sbjct 74 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGG 114 >seq824347 Length=112 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||||| || || | |||||| Sbjct 111 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 52 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||||||||||||||| |||||||||||||| || Sbjct 51 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGG 11 >seq831657 Length=112 Score = 104 bits (114), Expect = 5e-17 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || ||||| || |||| ||||||||||| | ||| | |||||||| |||||| Sbjct 11 TGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGC 70 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||||||| |||||||||||||| || Sbjct 71 TTTCCGGCGAAGATCAGACGCTGCTGGTCTGG 102 >seq831658 Length=112 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||||| | ||| | |||||| Sbjct 2 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 61 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||| |||||||| |||||||||||||| || Sbjct 62 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGG 102 >seq751460 Length=109 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||||| | ||| | |||||| Sbjct 108 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 49 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||||||| || ||||| |||||||||||||| || Sbjct 48 TCCAGCTGCTTTCCTGCAAAGATCAGACGCTGCTGGTCTGG 8 >seq1854222 Length=138 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||| | || || | ||||| Sbjct 134 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 75 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||||||| |||||||| |||||||||||||| || Sbjct 74 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGG 34 >seq831659 Length=112 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||| | || || | |||||| Sbjct 2 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 61 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||| |||||||| |||||||||||||| || Sbjct 62 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGG 102 >seq497311 Length=100 Score = 96.9 bits (106), Expect = 8e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || ||||| || |||| ||||||||||| || || | ||||||||||||||||||||| Sbjct 99 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCG 40 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||| |||||||||||||| || Sbjct 39 GCAAAGATCAGACGCTGCTGGTCTGG 14 >seq125919 Length=539 Score = 96.9 bits (106), Expect = 8e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || || |||||||| |||| ||||||||||| || ||| | |||||| Sbjct 93 AGAACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCATCT 34 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGC 199510 |||||||||||||| || ||||| ||||||||| Sbjct 33 TCCAGCTGCTTTCCTGCAAAGATCAGACGCTGC 1 >seq129324 Length=390 Score = 95.1 bits (104), Expect = 3e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 199429 GAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTT 199488 ||| || ||||| || |||| ||||||||| | || || | ||||||||||||||||| Sbjct 390 GAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTT 331 Query 199489 TCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||| |||||||| |||||||||||||| || Sbjct 330 TCCAGCGAAGATCAGACGCTGCTGGTCTGG 301 >seq1574934 Length=127 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || || | ||||||||||| || ||| | |||||| Sbjct 35 AGAACCAAGTGGAGGGTAGACTCTTTCTGAATGTTGTAGTCAGACAGAGTGCGGCCATCT 94 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGC 199510 |||||||||||||| || ||||| ||||||||| Sbjct 95 TCCAGCTGCTTTCCTGCAAAGATCAGACGCTGC 127 >seq1632298 Length=127 Score = 86.0 bits (94), Expect = 1e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || |||||||| |||| ||||||||||| || || | |||||| Sbjct 87 AGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 28 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGA 199504 |||||||||||||| || ||||| ||| Sbjct 27 TCCAGCTGCTTTCCTGCAAAGATCAGA 1 >seq500828 Length=100 Score = 84.2 bits (92), Expect = 5e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | |||||| || ||||| || |||| ||||||||||| || || | |||||| Sbjct 20 AGAACCAAGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 79 Query 199478 TCCAGCTGCTTTCCGGCGAAG 199498 ||||||||||||||||||||| Sbjct 80 TCCAGCTGCTTTCCGGCGAAG 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1133509253342686