Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2924339 120 3e-22 seq1854222 82.4 8e-11 seq831657 82.4 8e-11 >seq2924339 Length=450 Score = 120 bits (132), Expect = 3e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || |||||| || | || |||||| ||||| ||||||||||| || |||||| | || Sbjct 85 CAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATC 144 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || ||||||||||||||||| |||| ||||||||||||| ||| | || |||||||| Sbjct 145 CTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTC 204 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCT 46536 | |||||| ||||| || | | |||||||| Sbjct 205 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCT 240 >seq1854222 Length=138 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 114 CTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAA 55 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509 |||| ||||||||||| | || | || ||| ||||| |||||| Sbjct 54 GATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 7 >seq831657 Length=112 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | ||| ||| || ||||| |||||||| || |||||||| | || || Sbjct 5 ACCAAATGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCA 64 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||||||| |||||||| |||| ||||||||||| Sbjct 65 AGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTC 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543996331130160