Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq185656 104 2e-16 seq3000339 95.1 9e-14 >seq185656 Length=1083 Score = 104 bits (114), Expect = 2e-16 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 518183 GCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTT 518242 || || || ||||| || |||||||| || || || | |||||| ||||||||||| | Sbjct 294 GCCAAGGCGGCAGCCGTAGGTTCATTGATGATCCTGAGAACATTGAGACCAGCAATCACT 235 Query 518243 CCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACG 518302 || |||||||| || |||||||| || || |||||||| || || || ||||| || || Sbjct 234 CCGGCATCTTTGGTAGCTTGTCTCTGGGAGTCGTTAAAGTAGGCCGGTACAGTGATGACA 175 Query 518303 GCATC 518307 ||||| Sbjct 174 GCATC 170 >seq3000339 Length=1171 Score = 95.1 bits (104), Expect = 9e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 518561 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 518620 ||||| ||||||||||| || || || || || || | ||| || || || || Sbjct 930 TTGGCCGCATCTCCAATGAGTCTCTCGGTGTCGGTGAAGGCAACGTAACTGGGCGTAGTA 871 Query 518621 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 518680 || || ||||| ||||| ||||| || || ||||| ||||| || | ||||||||||| Sbjct 870 CGGTTGCCTTGTTCATTGGCAATGATCTCCACTTTGCCATTCTGGAAGACACCTACACAG 811 Query 518681 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | |||| || ||||| ||||| |||||||| Sbjct 810 GAATAAGTGGTGCCTAAGTCAATGCCAATAGC 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3631632050767348