Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq185656 93.3 5e-14 seq2863253 91.5 2e-13 >seq185656 Length=1083 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 7619 GCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 || || ||||| |||||||| || || | ||| || || |||||||| | | ||| Sbjct 288 GCGGCAGCCGTAGGTTCATTGATGATCCTGAGAACATTGAGACCAGCAATCACTCCGGCA 229 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 ||||| || ||||||| || || ||||||||||||||||| || || | ||| || || Sbjct 228 TCTTTGGTAGCTTGTCTCTGGGAGTCGTTAAAGTAGGCCGGTACAGTGATGACAGCATCT 169 Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | || || || ||||||| || || | ||| |||||||| || ||||| || Sbjct 168 TTCACCTTTAGCCCAAGATACGTCTCGGCTGTCTCTCTCATTTTGACCAGTACCATGGA 110 >seq2863253 Length=359 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||| || || ||||| ||||||||||| ||||||| ||||| ||| |||||||| Sbjct 119 TCCAATCAGTCGCTTAGCATCAAAAACAGTGTTTTCCGGGTTGCTGGTCAGCTGGTTCTT 178 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || ||||| |||||||| | | || || || ||||| || || || | Sbjct 179 GGCGGCATCACCGATGAGACGTTCCCCCTCGGCTGTGAAGGCCACGTAGGACGGTGTGAT 238 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTAC 8088 ||||| || |||||||| ||||| ||||| || Sbjct 239 ACGATTGCCCTGGTCGTTGGCAATGATTTCCAC 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611264048904720