Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2830548 100 3e-16 seq103958 98.7 1e-15 >seq2830548 Length=329 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | || || ||||||| ||| | ||| || || |||| |||| |||||| Sbjct 186 GTACTCAATGATCTCGGTACACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 127 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| ||||||| ||||||||||| |||||||| || || || ||||||||||| | Sbjct 126 ACTCTTGCTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGC 67 Query 106627 CTTGAGAATTGCCTTCCA 106644 || | || |||| ||| Sbjct 66 CTGCACGATGGCCTGCCA 49 >seq103958 Length=1487 Score = 98.7 bits (108), Expect = 1e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | ||| || || |||| ||| | ||| || || |||| |||| |||||| Sbjct 669 GTACTCGATAATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 610 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 |||||| ||||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct 609 ACTCTTACTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTG 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567808893799920