Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2503533 98.7 6e-15 seq36669 87.8 1e-11 >seq2503533 Length=209 Score = 98.7 bits (108), Expect = 6e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 475921 TGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAA 475980 |||||| || ||||| || | ||||| ||||| | | |||||| ||| | ||| || Sbjct 209 TGGAGGCATCATGACCAAATTGATTGAGAGAAACAGCCGCATCCCAAACAAGACATCCAA 150 Query 475981 AGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGA 476040 | ||| ||||||||||||| || || | | |||||||||||| | | ||||| || Sbjct 149 AACATTCACCACTTATTCTGACAACCAGCCTGCAGTAACCATCCAAGTTTACGAAGGAGA 90 Query 476041 AAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCC 476100 |||| | || ||||| || || | ||||| || ||| | || || || ||||| Sbjct 89 AAGAGCCATGACGAAAGACAACAATAGTCTTGGCACCTTTGAGCTGACTGGCATCCCTCC 30 Query 476101 TGCTCCCAGAGGAGTTCCTCAAATTGAAG 476129 |||||| | || || || | ||||||| Sbjct 29 AGCTCCCCGCGGTGTACCCAAGATTGAAG 1 >seq36669 Length=3211 Score = 87.8 bits (96), Expect = 1e-11 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 ||||||| ||| | || ||||| ||| || || | ||||| || |||| ||||| | Sbjct 394 TTGGTATCGATCTTGGCACTACCTACTCCTGCGTGGGTGTTTTCCAGCATGGCAAAGTGG 335 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | || ||||||||||| ||||| || |||| ||||| ||||| | || || || | Sbjct 334 AGATCATTGCCAATGATCAAGGCAACCGAACCACACCCAGCTATGTGGCCTTCACCGACA 275 Query 474453 CTGAACATCTTATTGGAGATGCT 474475 |||| | ||| || ||||||||| Sbjct 274 CTGAGCGTCTCATCGGAGATGCT 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3139217629045784