Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq103958 104 3e-17 seq2830548 89.7 6e-13 >seq103958 Length=1487 Score = 104 bits (114), Expect = 3e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 ||||||||||| || || || || ||||| ||||||||||| || |||| ||||||||| Sbjct 553 CAGACGGAGACCGGTACCCCGTACATGCTGTACAAGGATGCCTGCAACAGTAAGAGTAAC 612 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||| |||| |||| || |||||| || || || |||||||| ||| | |||||| Sbjct 613 CAACAGAACCTGGGCACCATCAAGTGCAGTAACCTGTGCACGGAGATTATCGAGTAC 669 >seq2830548 Length=329 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 ||||||||||| || || || || ||||| ||||||||||| || |||| ||||||||| Sbjct 70 CAGACGGAGACCGGTACCCCGTACATGCTGTACAAGGATGCCTGCAACAGCAAGAGTAAC 129 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||| |||| |||| || |||||| || || || || || || || | |||||| Sbjct 130 CAACAGAACCTGGGCACCATCAAGTGCAGTAACCTGTGTACCGAGATCATTGAGTAC 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574150081919040