Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2924339 140 4e-28 seq2371163 118 1e-21 seq1834676 104 3e-17 seq3000339 98.7 1e-15 seq129324 98.7 1e-15 seq2795135 93.3 5e-14 seq602088 87.8 2e-12 seq831659 86.0 8e-12 seq831658 86.0 8e-12 seq824347 86.0 8e-12 seq823516 86.0 8e-12 seq36669 84.2 3e-11 seq2602911 82.4 1e-10 seq2246267 82.4 1e-10 seq831657 82.4 1e-10 >seq2924339 Length=450 Score = 140 bits (154), Expect = 4e-28 Identities = 145/189 (77%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 171903 CCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGA 171962 |||| |||||||| | ||||| ||||| || |||| |||||||| || || ||||| Sbjct 255 CCTC-AGGTTGAGCCCAGCGACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGA 197 Query 171963 AGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACG 172022 |||||| || ||||| ||||| || || || || || || || ||||| || ||||| || Sbjct 196 AGGCATCCCGCCCGACCAGCAGCGGCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGGCG 137 Query 172023 TACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCG 172082 |||||| | || |||||| | || |||||||| || || ||||| || || ||||| || Sbjct 136 CACCCTCTCCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTGAGGCTGCG 77 Query 172083 GGGTGGTGC 172091 ||| || || Sbjct 76 GGGCGGGGC 68 >seq2371163 Length=190 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || |||||||| || || ||||| ||||| || ||||| ||| Sbjct 42 GTGGTATGCAGATCTTCGTCAAAACCCTCACAGGCAAAACCATCACTCTTGAGGTCGAGC 101 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| || ||||||||||||| ||||| || || ||||| ||||| | Sbjct 102 CAAGTGACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGCATCCCACCAG 161 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAA 172004 | ||||| || || || ||||| || || Sbjct 162 ACCAGCAGCGTCTGATCTTTGCAGGAAA 189 >seq1834676 Length=136 Score = 104 bits (114), Expect = 3e-17 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| || || ||||| ||||| || ||||||||| Sbjct 128 GTGGTATGCAGATCTTCGTCAAGACCCTCACAGGCAAAACCATCACTCTTGAGGTTGAGC 69 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||||||||| || | || |||||||| ||||| || || ||||| ||||| | Sbjct 68 CAAGCGACACAATCGAGAATGTAAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCAG 9 Query 171977 ATCAGCA 171983 | ||||| Sbjct 8 ACCAGCA 2 >seq3000339 Length=1171 Score = 98.7 bits (108), Expect = 1e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 ||||||||| || || ||||| || ||||| || ||||| ||||| | || |||| Sbjct 778 AGCTATTGGCATTGACTTAGGCACCACTTATTCCTGTGTAGGTGTCTTCCAGAATGGCAA 837 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 || ||||| || | ||||| ||||| |||||||| || || ||||||||||| || Sbjct 838 AGTGGAGATCATTGCCAATGAACAAGGCAACCGTACTACGCCCAGTTACGTTGCCTTCAC 897 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATG 195466 || | || | ||| |||||||||| || || || ||| |||||| Sbjct 898 CGACACCGAGAGACTCATTGGAGATGCGGCCAAGAACCAGGTTGCTATG 946 >seq129324 Length=390 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| || || ||||| ||||| || ||||| ||| Sbjct 18 GTGGTATGCAGATCTTCGTCAAGACCCTCACAGGCAAAACCATCACACTTGAGGTCGAGC 77 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||||||||| || | || |||||||| ||||| || || ||||| ||||| | Sbjct 78 CAAGTGACACAATCGAGAATGTAAAGGCCAAGATCCAAGACAAAGAGGGCATCCCACCAG 137 Query 171977 ATCAGCA 171983 | ||||| Sbjct 138 ACCAGCA 144 >seq2795135 Length=304 Score = 93.3 bits (102), Expect = 5e-14 Identities = 180/266 (68%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 198738 ATCATCTTCATTGATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAACTACTACACCT 198797 ||||||||||||||||||||||||||||||||| | ||||||| || | Sbjct 282 ATCATCTTCATTGATGAGATTGACGCTGTTGGTCGTCATCGTGGTGCCGGTATGGGCGGT 223 Query 198798 GGTAATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGAC 198857 || | || |||||||||||||| | |||||| | ||| ||||||||| || || ||| Sbjct 222 GGCCACGACGAGCGTGAGCAGACCTTGAACCAGTTGCTCGTTGAGATGGACGGCTTCGAC 163 Query 198858 AATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCA 198917 | || || | |||| || || || || | || | || || || Sbjct 162 GTCCATGGCGGCGTCATTCTGATCGCGGCGACGAACCGCCCCGACGTTCTTGACCCGGCT 103 Query 198918 CTGCTTCGTCCCGGTCGATTCGACCGTAAGATTCAAGTGTCCCTTCCAAGTGTCAAGGGC 198977 ||||| ||||| || || ||||||||| |||| |||| ||| | || | ||| Sbjct 102 CTGCTACGTCCTGGGCGTTTCGACCGTCAGATCGCAGTGGAGGCTCCGGATCTCGATGGC 43 Query 198978 CGCCTCAAGATTCTTGGGGTTCATGC 199003 || ||||||||||| |||||| || Sbjct 42 CGTCTCAAGATTCTCAAGGTTCACGC 17 >seq602088 Length=103 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 171864 GCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGA 171923 ||| ||||| || || ||||| || || ||||| |||||||| ||||| ||| | || Sbjct 1 GCAGATCTTCGTCAAGACCCTCACAGGCAAAACCATCACCCTTGAGGTCGAGCCAAGTGA 60 Query 171924 CACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGC 171966 ||||||||| ||| ||||||||||||| || || || || ||| Sbjct 61 CACAATCGAGAACGTCAAAGCCAAGATCCAGGACAAAGAGGGC 103 >seq831659 Length=112 Score = 86.0 bits (94), Expect = 8e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 171964 GGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGT 172023 ||||| ||||| || ||||| || || || || ||||| || |||||||||||||| || Sbjct 111 GGCATCCCACCAGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGC 52 Query 172024 ACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| | || |||||| | || || ||||| || || ||| | ||||| Sbjct 51 ACCCTGTCCGACTACAACATCCAGAAAGAGTCCACCCTCCACTTGGTTCT 2 >seq831658 Length=112 Score = 86.0 bits (94), Expect = 8e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 171964 GGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGT 172023 ||||| ||||| || ||||| || || || || ||||| || |||||||||||||| || Sbjct 111 GGCATCCCACCAGACCAGCAGCGTCTGATCTTCGCTGGAAAGCAGCTTGAAGATGGCCGC 52 Query 172024 ACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || |||| |||||| | || || ||||| || || ||| | ||||| Sbjct 51 ACTCTTTCTGACTACAACATCCAGAAAGAGTCCACCCTCCACTTGGTTCT 2 >seq824347 Length=112 Score = 86.0 bits (94), Expect = 8e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 171964 GGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGT 172023 ||||| ||||| || ||||| || || || || || || || |||||||||||||| || Sbjct 2 GGCATCCCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGC 61 Query 172024 ACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 ||||| |||| |||||| | || || ||||| || || ||| | ||||| Sbjct 62 ACCCTGTCTGACTACAACATCCAGAAAGAGTCCACCCTCCACTTGGTTCT 111 >seq823516 Length=112 Score = 86.0 bits (94), Expect = 8e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939 ||||| || || ||||| ||||| || ||||| ||| | ||||||||||| ||| || Sbjct 111 ACCCTCACAGGCAAAACCATCACTCTTGAGGTCGAGCCAAGTGACACAATCGAGAACGTC 52 Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 || |||||||| || || || || ||||| ||||| || ||||| || || Sbjct 51 AAGGCCAAGATCCAGGACAAAGAGGGCATCCCACCAGACCAGCAGCGTCT 2 >seq36669 Length=3211 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 195294 CTCAAGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATG 195353 ||| |||| ||||||||||| | || ||||| ||||| || || ||||| | || ||| Sbjct 403 CTCCAGCTGTTGGTATCGATCTTGGCACTACCTACTCCTGCGTGGGTGTTTTCCAGCATG 344 Query 195354 ATCGTGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCT 195413 || ||||| || | ||||| ||||| ||||| || || || || || |||| Sbjct 343 GCAAAGTGGAGATCATTGCCAATGATCAAGGCAACCGAACCACACCCAGCTATGTGGCCT 284 Query 195414 TTACAGATAATGAACGTCTCGTTGGAGATGC 195444 | || || | ||| |||||| | |||||||| Sbjct 283 TCACCGACACTGAGCGTCTCATCGGAGATGC 253 >seq2602911 Length=230 Score = 82.4 bits (90), Expect = 1e-10 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 195364 GATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAA 195423 ||| ||| | ||||| ||||| ||||| || || || || || || || || || | Sbjct 230 GATCATCGCCAATGATCAAGGCAACCGAACCACACCCAGCTATGTGGCTTTCACCGACAC 171 Query 195424 TGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGT 195483 |||||||| |||||||||| || || |||||| ||||||||||| | |||||| || Sbjct 170 CGAACGTCTTATTGGAGATGCTGCCAAGAATCAGGTGGCTATGAACCCCAGCAATACAGT 111 Query 195484 CTTTG 195488 |||| Sbjct 110 GTTTG 106 >seq2246267 Length=175 Score = 82.4 bits (90), Expect = 1e-10 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 |||||||||||||| || || || | ||||| || ||||| |||| ||| || || || Sbjct 1 ACCTGCTTACTTCAACGACTCCCAGAGGCAGGCTACCAAGGATGCTGGTGCCATCGCTGG 60 Query 195784 TCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 || || ||| || || || |||||||| || ||||| ||||| | || || ||||| | Sbjct 61 ACTGAA-TGTCCTCAGGATCATCAATGAGCCCACAGCAGCTGCTCTGGCCTACGGTCTTG 119 Query 195843 ACAAGAA 195849 | ||||| Sbjct 120 ATAAGAA 126 >seq831657 Length=112 Score = 82.4 bits (90), Expect = 1e-10 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 171964 GGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGT 172023 ||||| ||||| || ||||| || || || || || || || |||||||||||||| || Sbjct 111 GGCATCCCACCAGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTTGAAGATGGCCGC 52 Query 172024 ACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 || || |||| |||||| | || || |||||||| || || | ||||| Sbjct 51 ACTCTTTCTGACTACAACATCCAGAAAGAGTCTACCCTCCATTTGGTTCT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633139454057760