Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq462368 102 3e-17 >seq462368 Length=600 Score = 102 bits (112), Expect = 3e-17 Identities = 199/290 (69%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 40057 CGCCCATCGGACCAGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGT-TGTCC 40115 ||||||| || || || || ||||| || | ||||| ||||| |||||| |||| Sbjct 15 CGCCCATAGGGCCCGGGCGATACAGGGCTAGCACGGCAACAATGTCGTCGAAGCATGTCG 74 Query 40116 GGCTTCAGCAGACGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGC 40175 | | || || || |||| || | ||| || ||| || ||||||||||| || Sbjct 75 GACC-CATGAGCCGCAGCAACGACCTCATGGCCGTGCCATCAAGCTGGAAGACGCCTAGG 133 Query 40176 GTGTCGCCCCTGGCCAGCAGCTCGTACGTCGCGGGGTCGTCCAGGGGGATGTTCTCCAGG 40235 |||||||| | ||||||| |||||| || | ||| || |||| |||||| | || Sbjct 134 GTGTCGCCGCGCGCCAGCATCTCGTAGGTTGTCTTGTCATCAAGGGCGATGTTTTTGAGA 193 Query 40236 TCGACGTGCTCCCCACGGTTGAGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGG 40295 ||||| | ||| |||||| |||| ||| || | ||||||| |||| Sbjct 194 TCGACATCAATCCCCCGGTTGGCCTTGATGATCTTGATGCAATGATCCATGATACCGAGG 253 Query 40296 TTCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGAGCCTCGCAGCT 40345 || || || || |||||||||||||||| || |||| ||||| |||| Sbjct 254 TTGCGCAGGCCCAGGAAGTCCATCTTCATGAGCCCCATCTCCTCG-AGCT 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158959562258344