Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq103958 95.1 3e-14 seq2830548 84.2 6e-11 >seq103958 Length=1487 Score = 95.1 bits (104), Expect = 3e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || | |||||| |||||||||| | |||||||||||| | |||| ||||| Sbjct 669 GTACTCGATAATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 610 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | |||||||| || ||||||||||| || ||||| ||||| || |||||| |||| || Sbjct 609 ACTCTTACTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGC 550 >seq2830548 Length=329 Score = 84.2 bits (92), Expect = 6e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708 ||||||||| | |||||||||||| | |||| |||||| || ||||| || ||| Sbjct 167 CACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTTACTCTTGCTGTTGCAGGCA 108 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCAG 155768 |||||||| || ||||| ||||| || |||||| |||| || | || || ||||| Sbjct 107 TCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTGGGCCTGCACGATGGCCTGCCAG 48 Query 155769 AGGTCACGGGCATTAATTTGCTTG 155792 || | |||| || || | |||| Sbjct 47 AGATACTGGGCCTTGATCTTCTTG 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1415122828212346