Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq2873036 84.2 3e-11 seq2756394 84.2 3e-11 seq185660 84.2 3e-11 >seq2873036 Length=370 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 122774 TAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCAG 122832 |||||||| ||||||||||| | ||||||||||| | |||||||||||||||||||||| Sbjct 135 TAGCTCAGATGGTTAGAGCAGCGGACTTTTAATCCGCGGGTCCTGGGTTCGAGTCCCAG 77 >seq2756394 Length=282 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Plus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 221 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 279 Query 122832 GAC 122834 || Sbjct 280 TAC 282 >seq185660 Length=750 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/63 (90%), Gaps = 1/63 (2%) Strand=Plus/Minus Query 122772 GTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCCA 122831 ||||||||||| ||| |||||||| ||||||||||| ||||||| ||||||||||||||| Sbjct 63 GTTAGCTCAGTCGGT-AGAGCATCAGACTTTTAATCTGAGGGTCATGGGTTCGAGTCCCA 5 Query 122832 GAC 122834 || Sbjct 4 TAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794878247866320