Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2924339 129 4e-25 seq1854222 102 5e-17 seq824347 93.3 3e-14 seq1385232 91.5 9e-14 seq831659 89.7 3e-13 seq497311 89.7 3e-13 seq2371163 87.8 1e-12 seq129324 86.0 4e-12 seq831658 84.2 1e-11 seq572346 84.2 1e-11 >seq2924339 Length=450 Score = 129 bits (142), Expect = 4e-25 Identities = 109/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || |||| || |||||| |||||||| | |||| ||||||||| ||||| ||||| || Sbjct 71 CCGCCCCGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 130 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| ||||| |||| ||||| ||||| |||||||||||||| || |||||||| |||| Sbjct 131 AGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGG 190 Query 34871 ACCCCCTCCTTGTC 34884 | || |||||||| Sbjct 191 ATGCCTTCCTTGTC 204 >seq1854222 Length=138 Score = 102 bits (112), Expect = 5e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 134 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 75 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||||||| ||||||||||| || ||||||||| | || | ||||| ||||| Sbjct 74 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTC 16 >seq824347 Length=112 Score = 93.3 bits (102), Expect = 3e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 111 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 52 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT 34864 || || |||||||||||||||||||| || ||||||||| Sbjct 51 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCT 13 >seq1385232 Length=127 Score = 91.5 bits (100), Expect = 9e-14 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || ||| | || |||| Sbjct 14 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCT 73 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTC 34878 ||||| ||||||||||| |||||||| || ||||||||| | || | ||||| Sbjct 74 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTC 126 >seq831659 Length=112 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || ||| |||| |||| Sbjct 2 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 61 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT 34864 || || |||||||| ||||||||||| || ||||||||| Sbjct 62 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCT 100 >seq497311 Length=100 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34780 GGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839 |||| ||| ||||| ||||| ||||| || ||| |||| |||| ||||| |||||||| Sbjct 100 GGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCC 41 Query 34840 GGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTC 34878 ||| |||||||| || ||||||||| | || | ||||| Sbjct 40 GGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTC 2 >seq2371163 Length=190 Score = 87.8 bits (96), Expect = 1e-12 Identities = 108/146 (74%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 34834 CTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893 |||||| || |||||||| || ||||||||| | || | ||||| ||||| | || || Sbjct 190 CTTTCCTGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 131 Query 34894 TTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 |||||| || || || | ||| | | |||||| |||| || ||||| || || Sbjct 130 GGCTTTGAC--ATTCTCGATGGTGTCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCT 73 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || || ||||||||||| Sbjct 72 GTGAGGGTTTTGACGAAGATCTGCAT 47 >seq129324 Length=390 Score = 86.0 bits (94), Expect = 4e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 34780 GGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCC 34839 |||| ||| ||||| ||||| ||||| || ||| |||| |||| ||||| |||||||| Sbjct 387 GGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTTCC 328 Query 34840 GGCGAAGATCAGTCGTTGCTGGTCT 34864 ||||||||||| || ||||||||| Sbjct 327 AGCGAAGATCAGACGCTGCTGGTCT 303 >seq831658 Length=112 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| ||| ||||| ||||| ||||| || || |||| |||| Sbjct 2 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 61 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT 34864 || || |||||||| ||||||||||| || ||||||||| Sbjct 62 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCT 100 >seq572346 Length=102 Score = 84.2 bits (92), Expect = 1e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| ||||| ||||| ||||| || || |||| |||| ||||| |||||||||||||| Sbjct 12 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 71 Query 34846 GATCAGTCGTTGCTGGTCT 34864 |||||| || ||||||||| Sbjct 72 GATCAGACGCTGCTGGTCT 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313759022737502