Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq185656 109 4e-18 seq3000339 95.1 9e-14 >seq185656 Length=1083 Score = 109 bits (120), Expect = 4e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 282350 GCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTT 282409 || || || ||||| || |||||||| || || || | |||||| ||||||||||| | Sbjct 294 GCCAAGGCGGCAGCCGTAGGTTCATTGATGATCCTGAGAACATTGAGACCAGCAATCACT 235 Query 282410 CCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACG 282469 || |||||||| || |||||||| || || |||||||| || || || ||||| || || Sbjct 234 CCGGCATCTTTGGTAGCTTGTCTCTGGGAGTCGTTAAAGTAGGCCGGTACAGTGATGACA 175 Query 282470 GCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTT 282519 |||||| | || | | |||| ||| | ||||| | | ||||||| Sbjct 174 GCATCTTTCACCTTTAGCCCAAGATACGTCTCGGCTGTCTCTCTCATTTT 125 >seq3000339 Length=1171 Score = 95.1 bits (104), Expect = 9e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 ||||| ||||||||||| || || || || || || | ||| || || || || Sbjct 930 TTGGCCGCATCTCCAATGAGTCTCTCGGTGTCGGTGAAGGCAACGTAACTGGGCGTAGTA 871 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 || || ||||| ||||| ||||| || || ||||| ||||| || | ||||||||||| Sbjct 870 CGGTTGCCTTGTTCATTGGCAATGATCTCCACTTTGCCATTCTGGAAGACACCTACACAG 811 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGC 282879 | |||| || ||||| ||||| |||||||| Sbjct 810 GAATAAGTGGTGCCTAAGTCAATGCCAATAGC 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3593026017491508