Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq366387 84.2 2e-11 seq2770637 82.4 9e-11 >seq366387 Length=702 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 146907 CAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG 146966 || ||| | || ||||| || | |||||| |||||||||||| || || | ||| || Sbjct 115 CACCTGTACTTCCAGGGCGTCAATGTGGTTTTTGTAGACGTGCGCATCACCGATGGTATG 56 Query 146967 CACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAG 147017 |||||||| || ||| | ||||| || |||||||| | ||||||||| || Sbjct 55 AACAAAGTCGCCGGGCGTCAGGCCAGTAACGTGGGCAATCATGTAGGTCAG 5 >seq2770637 Length=290 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 146910 CTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCAC 146969 ||| | || ||||| || | |||||| |||||||||||| || || | ||| || || Sbjct 179 CTGTACTTCCAGGGCGTCGATGTGGTTTTTGTAGACGTGCGCATCACCAATGGTATGAAC 238 Query 146970 AAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAG 147017 |||||| || ||| | |||||||| ||||| || | ||||||||| || Sbjct 239 AAAGTCGCCGGGCGTCAGGCCGGTAACGTGTGCAATCATGTAGGTCAG 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561560097931200