Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2986189 89.7 7e-13 seq315344 84.2 3e-11 >seq2986189 Length=758 Score = 89.7 bits (98), Expect = 7e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 39936 CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTT 39995 ||||||| || || || ||||||||||| |||| |||||||||||| || ||| || | Sbjct 273 CCATCTGGAAGCCATAGAAACATCTTGCCTCAGGAATTTGTACCTCCTGACTAAACCTCT 332 Query 39996 CCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAA 40055 | | | || ||||| ||||| |||||||| || ||||| || |||| | || || | Sbjct 333 CTACGAGGTTCTCATTGACTATACCATCACTTGCTGCAAAGAAGGCCAGGATGTGCTTGA 392 Query 40056 TAAAATATT 40064 | |||| || Sbjct 393 TGAAATGTT 401 >seq315344 Length=497 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||||||||| | ||| || || ||||| || ||||| || || || || | || Sbjct 282 TGGAATTCCCCAGAGAGCACCCTGCGGGTGTAGATGTTACTTGTGTAGGGCTCAATGGAC 341 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 || ||||| ||||| || ||||| || || ||||| ||||| || |||| || | ||| Sbjct 342 TCGTTATTGCCCAGGATCTGAGCTGTGGAGGCAGTGGGCATGGGGGCCAGCAGGAGACTG 401 Query 68839 TTTCTAAGACC 68849 || || || || Sbjct 402 TTCCTGAGCCC 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661094269287120