Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2830548 95.1 1e-14 seq103958 95.1 1e-14 >seq2830548 Length=329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 |||||| | || || ||||| | ||| | ||| || || |||| |||| |||||| Sbjct 186 GTACTCAATGATCTCGGTACACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 127 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 |||||| ||||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct 126 ACTCTTGCTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTG 70 >seq103958 Length=1487 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 111280 GTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 111339 |||||| | ||| || || || | ||| | ||| || || |||| |||| |||||| Sbjct 669 GTACTCGATAATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGTTGGTT 610 Query 111340 ACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 111396 |||||| ||||||| ||||||||||| |||||||| || || || ||||||||||| Sbjct 609 ACTCTTACTGTTGCAGGCATCCTTGTACAGCATGTACGGGGTACCGGTCTCCGTCTG 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 604430102116800