Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq462368 98.7 3e-16 >seq462368 Length=600 Score = 98.7 bits (108), Expect = 3e-16 Identities = 183/266 (69%), Gaps = 2/266 (1%) Strand=Plus/Plus Query 39441 CGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAAGT-TGTCG 39499 ||||||| || ||||| || ||||| || | ||||| ||||| |||||| ||||| Sbjct 15 CGCCCATAGGGCCCGGGCGATACAGGGCTAGCACGGCAACAATGTCGTCGAAGCATGTCG 74 Query 39500 GGCTTCAGCAGGCGGAGCAGGGAGCGCATCGCACCGCCGTCGAGCTGGAACACCGAGAGC 39559 | | || || || |||| || | ||| || ||| || |||||||| || || Sbjct 75 GACC-CATGAGCCGCAGCAACGACCTCATGGCCGTGCCATCAAGCTGGAAGACGCCTAGG 133 Query 39560 GTGTCACCCTTGGCCAGCAGCTCGTAGGTCGGGGCGTCGTCCAGCGGGATGTTCTCCAGG 39619 ||||| || ||||||| ||||||||| | ||| || || | |||||| | || Sbjct 134 GTGTCGCCGCGCGCCAGCATCTCGTAGGTTGTCTTGTCATCAAGGGCGATGTTTTTGAGA 193 Query 39620 TCGACGTGCTCCCCACGGTTACGACGGATGTTCTCGACGGCGTCGCCCATGATCGTGAGG 39679 ||||| | ||| ||||| |||| ||| || | | ||||||| |||| Sbjct 194 TCGACATCAATCCCCCGGTTGGCCTTGATGATCTTGATGCAATGATCCATGATACCGAGG 253 Query 39680 TTCCGCAGGCCGAGGAAGTCCATCTT 39705 || |||||||| |||||||||||||| Sbjct 254 TTGCGCAGGCCCAGGAAGTCCATCTT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154679620633692