Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq462368 109 2e-19 >seq462368 Length=600 Score = 109 bits (120), Expect = 2e-19 Identities = 200/289 (69%), Gaps = 3/289 (1%) Strand=Plus/Plus Query 38349 GCCCATCGGACCCGGACGGTACAGCGCGACGACGGCCGAGATGTCCTCGAA-CTGGTCCG 38407 |||||| || ||||| || ||||| || | ||||| ||||| ||||| | ||| | Sbjct 16 GCCCATAGGGCCCGGGCGATACAGGGCTAGCACGGCAACAATGTCGTCGAAGCATGTCGG 75 Query 38408 GCTTCAGCAGGCGAAGCAGGGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGGG 38467 | || || || |||| || | ||| || ||| || ||||||||||| |||| Sbjct 76 ACC-CATGAGCCGCAGCAACGACCTCATGGCCGTGCCATCAAGCTGGAAGACGCCTAGGG 134 Query 38468 TGTCGCCCCTGGCCAGCAGCTCGTAGGTTGCCGGGTCGTCCAGCGGGATGTTCTCGATGT 38527 ||||||| | ||||||| ||||||||||| | ||| || || | |||||| | || | Sbjct 135 TGTCGCCGCGCGCCAGCATCTCGTAGGTTGTCTTGTCATCAAGGGCGATGTTTTTGAGAT 194 Query 38528 CGACGTGCTCACCACGGTTGCGGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGGT 38587 |||| | || |||||| |||| ||| || | ||||||| ||||| Sbjct 195 CGACATCAATCCCCCGGTTGGCCTTGATGATCTTGATGCAATGATCCATGATACCGAGGT 254 Query 38588 TCCGGAGCCCGAGGAAGTCCATCTTCAGCAGGCCCAGGGCCTCGCAGCT 38636 | || || || |||||||||||||||| || |||| ||||| |||| Sbjct 255 TGCGCAGGCCCAGGAAGTCCATCTTCATGAGCCCCATCTCCTCG-AGCT 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154013097640956