Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2924339 132 1e-25 seq1854222 100 6e-16 seq2371163 91.5 3e-13 seq751460 89.7 1e-12 seq129324 86.0 1e-11 seq1385232 84.2 5e-11 seq831659 84.2 5e-11 seq831658 84.2 5e-11 seq824347 84.2 5e-11 >seq2924339 Length=450 Score = 132 bits (146), Expect = 1e-25 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || || || || || ||||| || |||||||| || |||||||| || || | ||||| Sbjct 77 CGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 136 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| |||||||||||||| |||||||| || || || ||||| || || | ||| Sbjct 137 CGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGGATGCCT 196 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTC 211054 ||||||||||||||||| || || || ||||||||||| Sbjct 197 TCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 237 >seq1854222 Length=138 Score = 100 bits (110), Expect = 6e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| |||||||| || || | ||||| | ||||| Sbjct 134 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCC 75 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || |||||||| || || || ||||| || || | || || ||||| Sbjct 74 TCCAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCT 15 Query 211023 TGGATCTT 211030 |||||||| Sbjct 14 TGGATCTT 7 >seq2371163 Length=190 Score = 91.5 bits (100), Expect = 3e-13 Identities = 109/147 (74%), Gaps = 6/147 (4%) Strand=Plus/Minus Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| ||||| ||||| || || || ||||| || || | || || ||||| |||||||| Sbjct 190 CTTTCCTGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTT 131 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATCGTCTTTCC 211087 ||| || || |||||||||||| ||| || ||||| |||||||| || || || Sbjct 130 GGCTTTGACATTCTCGATGGTGTCA---CTTGGCTCGACCTCAAGAGTGATGGTTTTGCC 74 Query 211088 CGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || | |||||| Sbjct 73 TGTGAGGGTTTTGACGAAGATCTGCAT 47 >seq751460 Length=109 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| |||||||| || || | ||| || | |||||| Sbjct 108 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 49 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||| ||||| ||||| || || || ||||| || || Sbjct 48 TCCAGCTGCTTTCCTGCAAAGATCAGACGCTGCTGGTCTGGTGG 5 >seq129324 Length=390 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 210915 AGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTG 210974 || ||||||||||| |||||||| || || | ||||| | ||||||||||||||||| Sbjct 389 AGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCCAGCTGCTTT 330 Query 210975 CCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || || || ||||| || || Sbjct 329 CCAGCGAAGATCAGACGCTGCTGGTCTGGTGG 298 >seq1385232 Length=127 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| |||||||| || || | ||||| | |||||| Sbjct 14 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTACGGCCATCT 73 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||| || || ||||| || || || ||||| || || Sbjct 74 TCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCTGGTGG 117 >seq831659 Length=112 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| |||||||| || || | ||||| | |||||| Sbjct 2 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCT 61 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||| || || || ||||| || || Sbjct 62 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGG 105 >seq831658 Length=112 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| |||||||| || || | ||| || | |||||| Sbjct 2 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 61 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||| || || || ||||| || || Sbjct 62 TCAAGCTGCTTTCCAGCGAAGATCAGACGCTGCTGGTCTGGTGG 105 >seq824347 Length=112 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || ||||||||||| |||||||| || || | ||||| | |||||| Sbjct 111 AGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 52 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||| || || || ||||| || || Sbjct 51 TCAAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGTGG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1114501183141170