Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2660963 116 3e-21 >seq2660963 Length=245 Score = 116 bits (128), Expect = 3e-21 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || |||| || ||||| || || || ||||| || ||| |||| |||||||| || Sbjct 235 TCATCTCGACTGATCAGCTCATTGGAGAACGTCAAACCGTGCATCTTTCCTCTCTTCTTC 176 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || | |||||| ||||| || ||||| ||||| ||||||||||| || || Sbjct 175 AGCCAGAAGATGGAGGCAAAGGACCCCGAGAAGAAAATGCCCTCTACGGCGGCGAAGGCC 116 Query 4692 ACTAATCGGGACCCGAACGAGCTGGCTTTGTCT---TTAATCCATTTTAATGCCCAGTTA 4748 || | ||| ||| ||| ||| |||| || ||||| || |||||||||| | Sbjct 115 ACAACTCGCTCGCCGTACG---TGGTCGAGTCTGAGTTGATCCAGTTCAATGCCCAGTCA 59 Query 4749 GCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA 4789 ||||| | ||| ||||| || | || | || ||||| || Sbjct 58 GCTTTCTGCTTGACGCAAGGTAGGGTCTCAATGGCGTTGAA 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411401987260514