Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq462368 111 5e-20 >seq462368 Length=600 Score = 111 bits (122), Expect = 5e-20 Identities = 187/268 (70%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 39433 CGCCCATCGGACCCGGACGGTACAGCGCGACGACGGCGCTGATGTCCTCGAAGT-TGTCC 39491 ||||||| || ||||| || ||||| || | ||||| ||||| |||||| |||| Sbjct 15 CGCCCATAGGGCCCGGGCGATACAGGGCTAGCACGGCAACAATGTCGTCGAAGCATGTCG 74 Query 39492 GGCTTCAGCAGGCGGAGCAGTGAGCGCATCGCGCCGCCGTCGAGCTGGAAGACCGAGAGC 39551 | | || || || |||| || | ||| || ||| || ||||||||||| || Sbjct 75 GACC-CATGAGCCGCAGCAACGACCTCATGGCCGTGCCATCAAGCTGGAAGACGCCTAGG 133 Query 39552 GTGTCGCCCCTGGCCAGCAGCTCGTAGGTAGCAACGTCGTCCAGCGGGATGTTCTCCAGG 39611 |||||||| | ||||||| ||||||||| | ||| || || | |||||| | || Sbjct 134 GTGTCGCCGCGCGCCAGCATCTCGTAGGTTGTCTTGTCATCAAGGGCGATGTTTTTGAGA 193 Query 39612 TCGACGTGCTCCCCACGGTTGGCGCGGATGTTCTCGACCGCGTCGCCCATGATCGTGAGG 39671 ||||| | ||| |||||||| |||| ||| || | ||||||| |||| Sbjct 194 TCGACATCAATCCCCCGGTTGGCCTTGATGATCTTGATGCAATGATCCATGATACCGAGG 253 Query 39672 TTCCGGAGCCCGAGGAAGTCCATCTTCA 39699 || || || || |||||||||||||||| Sbjct 254 TTGCGCAGGCCCAGGAAGTCCATCTTCA 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154423503002224