Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2924339 107 4e-18 seq1854222 100 6e-16 seq2371163 96.9 7e-15 seq1385232 93.3 8e-14 seq2221674 86.0 1e-11 seq2150485 86.0 1e-11 seq1540373 86.0 1e-11 seq1277896 86.0 1e-11 seq1155785 86.0 1e-11 seq831657 86.0 1e-11 seq751460 86.0 1e-11 seq572346 86.0 1e-11 seq497311 86.0 1e-11 seq467002 86.0 1e-11 seq321021 86.0 1e-11 seq225657 86.0 1e-11 seq2067406 84.2 4e-11 seq1632298 84.2 4e-11 seq1627265 84.2 4e-11 >seq2924339 Length=450 Score = 107 bits (118), Expect = 4e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| | || ||||| || | ||| || || |||||||||||||| | Sbjct 71 CCGCCCCGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 130 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 131 AGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGG 190 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 || || |||||||| |||||||| || || || | ||||| ||||| Sbjct 191 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTC 237 >seq1854222 Length=138 Score = 100 bits (110), Expect = 6e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||||| | || |||||||||||||| || || || || || ||| Sbjct 113 TCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCCAGCTGCTTTCCAGCGAAG 54 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 283021 |||| ||| || ||||| || || ||||| |||||||||||||| || || Sbjct 53 ATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTT 1 >seq2371163 Length=190 Score = 96.9 bits (106), Expect = 7e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || |||||||||| ||| || ||||| || || ||||| |||||||||||||| Sbjct 189 TTTCCTGCAAAGATCAGACGCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTG 130 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | ||||| ||||| | ||||| || |||||||| || || || || Sbjct 129 GCTTTGACATTCTCGATGGTGTCACTTGGCTCGACCTCAAGAGTGATGGTTTTGCCTGTG 70 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| |||||||| Sbjct 69 AGGGTTTTGACGAAGATCTGCAT 47 >seq1385232 Length=127 Score = 93.3 bits (102), Expect = 8e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 282875 ACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAG 282934 ||||||||| || || |||| || | ||| ||||| |||||||||||||||| || Sbjct 1 ACCACGCAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAG 60 Query 282935 CGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || |||||||| || || || || ||||||||||||| ||| || ||||| Sbjct 61 GGTACGGCCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTC 111 >seq2221674 Length=172 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 170 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 114 >seq2150485 Length=165 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 162 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 106 >seq1540373 Length=127 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 7 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 63 >seq1277896 Length=126 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 4 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 60 >seq1155785 Length=123 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 60 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 4 >seq831657 Length=112 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||||||| ||| ||||||||||| || || || || ||||| ||| Sbjct 23 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCGAAG 82 Query 282969 ATCAAACGTTGTTGGTC 282985 |||| ||| || ||||| Sbjct 83 ATCAGACGCTGCTGGTC 99 >seq751460 Length=109 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||||||| ||| ||||||||||| || || || || || |||||| Sbjct 87 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTTCCTGCAAAG 28 Query 282969 ATCAAACGTTGTTGGTC 282985 |||| ||| || ||||| Sbjct 27 ATCAGACGCTGCTGGTC 11 >seq572346 Length=102 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||||||| ||| ||||||||||| || || || || ||||| ||| Sbjct 13 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAAG 72 Query 282969 ATCAAACGTTGTTGGTC 282985 |||| ||| || ||||| Sbjct 73 ATCAGACGCTGCTGGTC 89 >seq497311 Length=100 Score = 86.0 bits (94), Expect = 1e-11 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 ||||| |||||||||||||||| || ||||||||||| || || || || ||||||||| Sbjct 93 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGCTTTCCGGCAAAG 34 Query 282969 ATCAAACGTTGTTGGTC 282985 |||| ||| || ||||| Sbjct 33 ATCAGACGCTGCTGGTC 17 >seq467002 Length=2166 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 2104 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 2160 >seq321021 Length=490 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 176 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCCATTCCCCG 120 >seq225657 Length=631 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 162 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 106 >seq2067406 Length=156 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCC 168809 ||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||| Sbjct 8 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCC 63 >seq1632298 Length=127 Score = 84.2 bits (92), Expect = 4e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | ||| || || |||||||||||||||| Sbjct 103 ACCACCACGCAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 44 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCA 282972 || ||||||||||| || || || || || |||||||||| Sbjct 43 CAGGGTGCGGCCATCTTCCAGCTGCTTTCCTGCAAAGATCA 3 >seq1627265 Length=127 Score = 84.2 bits (92), Expect = 4e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 168755 AGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 |||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 63 AGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1006418551527532