Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Patiriella_20regularis_20[genbank_20GCA_5F900067625.1_202017-02-10] 3,006,458 sequences; 949,333,185 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2924339 111 1e-19 seq430633 82.4 5e-11 >seq2924339 Length=450 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| |||| ||||||||| || ||| |||||| ||||||||||| |||| | Sbjct 71 CCGCCCCGCAGCCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 130 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| | || ||||||||||| ||||| ||||||| |||||||| || | || Sbjct 131 AGGGTGCGCCCATCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCGGGCGGG 190 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | |||||||| ||| ||||| ||| | | | ||||||||| || || ||| Sbjct 191 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGCTGGGCTCAACC 250 Query 44291 T 44291 | Sbjct 251 T 251 >seq430633 Length=574 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 44232 CACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCT 44291 |||| || || ||| |||||| ||| | | | |||||||||| || || |||| Sbjct 236 CACCCTCTTTGTCCTGTATCTTAGCCTTGACATTCTCGATGGTGTCGGAGGGCTCTACCT 177 Query 44292 CCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| |||||| ||||| ||||| ||||||||||| ||||| |||||| || Sbjct 176 CCAACGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATGCTG 127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346799917280586