Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 3e-12 >seq2 Length=60074718 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||||||| | ||| ||||| ||||| ||||| ||||| ||||| || || || Sbjct 56214015 CCTCCTCTAAGACGTAACACCAAGTGTAAGGTAGACTCTTTCTGGATATTGTAGTCCGAC 56214074 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | || || ||||| || || || ||||||||||| || ||||| || ||||| Sbjct 56214075 AAGGTACGGCCGTCTTCTAACTGCTTGCCGGCAAAAATCAACCTCTGCTGGTCGGGAGGG 56214134 Query 146171 ATTCCT 146176 |||||| Sbjct 56214135 ATTCCT 56214140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743479567130880