Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3 109 4e-19 >seq3 Length=91555047 Score = 109 bits (120), Expect = 4e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||||| ||||| ||||||||||| || |||||||||||||| |||||||| ||| Sbjct 20985438 GGTGATTTAGGTCCAGTGTATGGATTCCAGTGGAGACATTTTGGTGCTGAATACAAAGAC 20985497 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | ||| ||||| ||| ||||| || ||||| | || | || |||||| || Sbjct 20985498 ATGCATACAGATTATACTGGTCAAGGTGTGGATCAGCTGAAAGAGGTCATTAATAAGATA 20985557 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCT 20385 ||| || ||| | ||||| ||||| ||| | | || |||||| || Sbjct 20985558 GAAAAAAATCCAGATGACAGGAGAATCATTATGTCGGCTTGGAACCCT 20985605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399159484987855