Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 >seq5 Length=54553330 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 36863 TCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTG 36922 |||| |||| || ||||| |||||||||||| |||| |||| | |||||| || Sbjct 25744981 TCCAGGCGTAGAAGTGCATGCTGGTCAGTTTTCCGTAGTTAGGCTCGGCTATATGGATGT 25744922 Query 36923 TCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATT 36982 ||| || ||||| ||||| || ||||| ||||||||||||||||||| | | || Sbjct 25744921 TCAGAGACTGACTCTGATCAATGAACGCTCCTCTGTCGGCTGCCATTTTGAGCACTGTTT 25744862 Query 36983 TTTGAGATATCTCCCAAACCGTTTTATATA 37012 | || || || ||||| || || || |||| Sbjct 25744861 TCTGGGAGATTTCCCATACTGTCTTGTATA 25744832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468495288794160