Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=104615532 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||| || || |||||||| || ||||| | ||| ||||| | || | || | Sbjct 19031885 CCTCATCCCTGCTGATAAGTTCATTACTGAATGTAAGTCCAGGCATGATCCCCCTCTTCT 19031826 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | | ||| ||||| || ||||| || ||||| ||||| || || |||||||| Sbjct 19031825 TGAGCCAGAATATGGCGGCAAAACTTCCACTGAAGAAGATTCCTTCTACGGCAGCAAAGC 19031766 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073 | | | ||| ||||| | | | || | || |||||||| ||||||| || | Sbjct 19031765 CAACAACTCGCTCTCCGTAAGTAGATTCCTCGTCACCGATCCATTTAATAGCCCAGTCGG 19031706 Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTC 14122 || ||||| | | | |||||||||||| ||||| |||| ||| || Sbjct 19031705 CCTTCTTTTTCACACAGGGCATTGTTTCAATGGCATTGAATAGATACTC 19031657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479697783132600