Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 >seq9 Length=97764462 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||||| |||| ||| || || | ||||||||||||| || || | || || Sbjct 51006799 ACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAATCGGACAGAGTGCGGCCATCTTCA 51006740 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | ||||| |||||||| ||||| ||||| ||||| | || | || ||||| || | Sbjct 51006739 AGCTGTTTTCCGGCAAAGATCAAACGCTGCTGATCTGGGGGGATTCCCTCTTTGTCCTGG 51006680 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 || | || || | | | ||||| | ||| || || | || || ||||| Sbjct 51006679 ATTTTAGCCTTAACATTTTCGATAGTGTCTGAGGGCTCAACTTCAAGTGTGATTGTTTTG 51006620 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || ||||||||||| || || ||||| Sbjct 51006619 CCAGTGAGAGTTTTCACGAAGATCTGCAT 51006591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381346179020262