Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 1e-13 >seq9 Length=97764462 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || || || ||| ||||| ||||| ||| | || ||| || |||||||| Sbjct 51001963 CACCAAGTGGAGAGTTGACTCTTTTTGTATGTTATAAGCTTTCAGTTGCCGATCGTCCTC 51001904 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||| || ||| | |||| || || |||||||| || | | |||||||| Sbjct 51001903 GAGCTGTTTCCCGGCAAAAATCAAGCGTTGCTGATCAGGTGGTATTCCCTCCTTGTCTTG 51001844 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGG--TAGACTCCGTCTCGACTGTTATGGTT 48694 ||| |||| || | | ||||| |||| | || | ||| || || |||||| Sbjct 51001843 AATCTTCTTTTTCACGTTCTCTATGCTATCATCTTCATCTACATCTAGAGTG--ATGGTT 51001786 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| ||||| ||||||||||| ||||||||| Sbjct 51001785 TTACCAGTGAGTGTTTTCACAAAGATCTGCATC 51001753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421225329779039