Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq6 895 0.0 seq14 612 1e-170 >seq6 Length=53286271 Score = 895 bits (992), Expect = 0.0 Identities = 508/516 (98%), Gaps = 0/516 (0%) Strand=Plus/Minus Query 22879 AGGCTCATAAGACGCCCCAGCGTCGCCATCGTGCGTTCACCGAATACGTGCGCAACAACC 22938 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 15795507 AGGCTCATAAGACGCCCCAGCGTCGCCATAGTGCGTTCACCGAATACGTGCGCAACAACC 15795448 Query 22939 GTCTTCCGGAGCCTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGATTTAGCCCCGACG 22998 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15795447 GTCTTCCGGAGACTGTCATACGCGTAAAACAGCCAGCGCTGGCGCGATTTAGCCCCGACA 15795388 Query 22999 TATCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGCGC 23058 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15795387 TAGCCCCACTGTTCGTCCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGCGC 15795328 Query 23059 GAGGTTACCGACTGCGGCCTGAGTTTTTTAAATGGCGGAAAATCGTGTTGAGGCCAACGC 23118 ||||||||||||||||||||||||||||||| || || |||||||||||||||||||||| Sbjct 15795327 GAGGTTACCGACTGCGGCCTGAGTTTTTTAAGTGACGTAAAATCGTGTTGAGGCCAACGC 15795268 Query 23119 CCATAATGCGGGCGGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCT 23178 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15795267 CCATAATGCGGGCTGTTGCCCGGCATCCAACGCCATTCATGGCCATATCAATGATTTTCT 15795208 Query 23179 GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGT 23238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15795207 GGTGCGTACCGGGTTGAGAAGCGGTGTAAGTGAACTGCAGTTGCCATGTTTTACGGCAGT 15795148 Query 23239 GAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAG 23298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15795147 GAGAGCAGAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAG 15795088 Query 23299 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACC 23358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15795087 TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACC 15795028 Query 23359 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCT 23394 |||||||||||||||||||||||||||||||||||| Sbjct 15795027 ATCATACACTAAATCAGTAAGTTGGCAGCATCACCT 15794992 >seq14 Length=46529346 Score = 612 bits (678), Expect = 1e-170 Identities = 353/362 (98%), Gaps = 0/362 (0%) Strand=Plus/Plus Query 22775 GCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCG 22834 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42770493 GCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCG 42770552 Query 22835 GCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCC 22894 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42770553 GCCAGCCATCCGTCATCCATATCACCACGTCAAAGGGTGACAGCAGGCTCATAAGACGCC 42770612 Query 22895 CCAGCGTCGCCATCGTGCGTTCACCGAATACGTGCGCAACAACCGTCTTCCGGAGCCTGT 22954 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 42770613 CCAGCGTCGCCATAGTGCGTTCACCGAATACGTGCGCAACAACCGTCTTCCGGAGACTGT 42770672 Query 22955 CATACGCGTAAAACAGCCAGCGCTGGCGCGATTTAGCCCCGACGTATCCCCACTGTTCGT 23014 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 42770673 CATACGCGTAAAACAGCCAGCGCTGGCGCGATTTAGCCCCGACATAGCCCCACTGTTCGT 42770732 Query 23015 CCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGCGCGAGGTTACCGACTGCG 23074 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 42770733 CCATTTCCGCGCAGACGATGACGTCACTGCCCGGCTGTATGCGCGAGGTTACCGACTGCG 42770792 Query 23075 GCCTGAGTTTTTTAAATGGCGGAAAATCGTGTTGAGGCCAACGCCCATAATGCGGGCGGT 23134 ||||||||||||||| || || |||||||||||||||||||||||||||||| |||| || Sbjct 42770793 GCCTGAGTTTTTTAAGTGACGTAAAATCGTGTTGAGGCCAACGCCCATAATGGGGGCTGT 42770852 Query 23135 TG 23136 || Sbjct 42770853 TG 42770854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303216577473519