Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 seq1597 96.9 4e-15 >seq1 Length=104615532 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 |||||||| || || | ||||||| ||||| | || ||||| | || ||||| || Sbjct 19031883 TCATCCCTGCTGATAAGTTCATTACTGAATGTAAGTCCAGGCATGATCCCCCTCTTCTTG 19031824 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | ||| ||||| | ||||| ||| ||||| || || || ||||||||||| || Sbjct 19031823 AGCCAGAATATGGCGGCAAAACTTCCACTGAAGAAGATTCCTTCTACGGCAGCAAAGCCA 19031764 Query 21620 ACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCC 21679 || | ||| || ||||| |||||||| | || |||||||| ||||| | ||| Sbjct 19031763 ACAACTCGCTCTCCGTAAGTAGATTCCTCGTCACCGATCCATTTAATAGCCCAGTCGGCC 19031704 Query 21680 TTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGAT 21722 || | ||| | ||| ||||| ||||| || || || |||| Sbjct 19031703 TTCTTTTTCACACAGGGCATTGTTTCAATGGCATTGAATAGAT 19031661 >seq1597 Length=274804 Score = 96.9 bits (106), Expect = 4e-15 Identities = 155/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 |||||||| || || | ||||||| ||||| | || ||||| | || ||||| || Sbjct 211178 TCATCCCTGCTGATAAGTTCATTACTGAATGTAAGTCCAGGCATGATACCCCTCTTCTTC 211237 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 | ||| ||||| | ||||| ||| ||||| || || || ||||||||||| || Sbjct 211238 AGCCAGAATATGGCGGCAAAACTTCCACTGAAGAAGATTCCTTCTACGGCAGCAAAGCCA 211297 Query 21620 ACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCC 21679 || | ||| || ||||| |||||||| | || |||||||| ||||| | ||| Sbjct 211298 ACAACTCGCTCTCCGTAAGTAGATTCCTCGTCACCAATCCATTTAATAGCCCAGTCGGCC 211357 Query 21680 TTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAGAT 21722 || | || | ||| ||||| ||||| || || || |||| Sbjct 211358 TTCTTCTTCACACAGGGCATTGTTTCAATGGCATTGAATAGAT 211400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531867296898360