Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 3e-15 >seq9 Length=97764462 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | |||||||| || ||||||||||| |||| ||||| || || |||||| Sbjct 51001525 AATGCAGATCTTTGTAAAGACTTTAACTGGAAAGACGATCACCATTGACGTTGAGGCCGC 51001584 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || | | || ||| |||| || | || || ||||| || ||| || || Sbjct 51001585 GGAGGAGGTCAAAAAGGTGAAAGAAAAAATCATGGAGAAGGAAGGAATCCCTGTAGACCA 51001644 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 |||||| | || | | || || ||| | || ||||| || | | |||||||| Sbjct 51001645 GCAGAGATTAATATTTGCAGGTAAACAATTAGAGGATGATAGGTCCTTGCTGGATTATAA 51001704 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| ||||| || |||||| ||||| | ||| | || | |||||||| Sbjct 51001705 CATCCAAAAGGAGTCTACACTTCATCTGGTGCTCCGACTCAGAGGAGG 51001752 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || || ||| | || ||||| | ||||| | | || |||| | | Sbjct 51001981 AATGCAAATCTTCGTGAAGACACTTACAGGAAAGACAATTACTTTAAATGTAGAGGGCGA 51002040 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||| ||||| | || ||| | ||||| || ||||| || ||||| | || || Sbjct 51002041 TGACAGTATCGAAAATGTTAAAAAGAAGATCCTTGAAAAAGAGGGAATACCCCTTGACCA 51002100 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | | ||| ||||||||||| ||| || | | | ||||| || || Sbjct 51002101 ACAACGTTTGATCTTTGCCGGGAAGCAACTCGAGGATCACCGCATACTGAGCGACTACAA 51002160 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || || || || || |||| || || | | |||||||| || Sbjct 51002161 CATACAGAAGGAGTCCACGCTTCACTTGGTACTCCGTTTGAGAGGGGG 51002208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429909596421045