Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 4e-14 >seq9 Length=97764462 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 || |||||| || ||||| || || | || ||||| || || ||| | || ||| | Sbjct 51001522 AACAATGCAGATCTTTGTAAAGACTTTAACTGGAAAGACGATCACCATTGACGTTGAGGC 51001581 Query 115342 CAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | || || | | || ||| ||||||| || || ||||| |||| || || Sbjct 51001582 CGCGGAGGAGGTCAAAAAGGTGAAAGAAAAAATCATGGAGAAGGAAGGAATCCCTGTAGA 51001641 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||||| ||| | || | ||| || ||||||||||| ||||| | || || ||||| Sbjct 51001642 CCAGCAGAGATTAATATTTGCAGGTAAACAATTAGAGGATGATAGGTCCTTGCTGGATTA 51001701 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||| ||||| |||||||| | ||| ||||| | || | ||||||| Sbjct 51001702 TAACATCCAAAAGGAGTCTACACTTCATCTGGTGCTCCGACTCAGAGGAGG 51001752 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| || ||||||||||| ||||| || ||||| || || | ||| ||| || Sbjct 51006818 AATGCAGATATTTGTCAAAACTCTCACTGGCAAAACAATCACACTTGAAGTTGAGCCCTC 51006877 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||||| | | | | || || ||||| || ||||| || ||||| ||||| Sbjct 51006878 AGACACTATCGAAAATGTTAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGATCA 51006937 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | || | ||| || ||||| | ||||||| | || || ||||||| || Sbjct 51006938 GCAGCGTTTGATCTTTGCCGGAAAACAGCTTGAAGATGGCCGCACTCTGTCCGATTACAA 51006997 Query 115465 CATTCAAAAAGAGTCTACTATACA 115488 ||| || |||||||| || | ||| Sbjct 51006998 CATCCAGAAAGAGTCCACGAAACA 51007021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425317878428680