Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pinctada_20martensii_20[genbank_20GCA_5F002216045.1_202017-07-20] 5,039 sequences; 990,984,031 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq9 134 1e-26 >seq9 Length=97764462 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || |||||| | || || ||||| |||| |||||||| || || | Sbjct 51006591 ATGCAGATCTTCGTGAAAACTCTCACTGGCAAAACAATCACACTTGAAGTTGAGCCCTCA 51006650 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| || ||||| ||||| || || || ||||| Sbjct 51006651 GACACTATCGAAAATGTTAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGATCAG 51006710 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || |||||||| |||||| | || ||| |||||| | |||||||||||| Sbjct 51006711 CAGCGTTTGATCTTTGCCGGAAAACAGCTTGAAGATGGCCGCACTCTGTCCGATTACAAC 51006770 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || ||||| ||||| | ||||| ||| | || ||| | ||||| Sbjct 51006771 ATCCAGAAAGAGTCCACTCTCCATTTGGTTCTTCGTTTGAGAGGAGG 51006817 Score = 127 bits (140), Expect = 2e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||| | || || ||||| |||| |||||||| || || | Sbjct 51006819 ATGCAGATATTTGTCAAAACTCTCACTGGCAAAACAATCACACTTGAAGTTGAGCCCTCA 51006878 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || ||||| || ||||| ||||| || || || ||||| Sbjct 51006879 GACACTATCGAAAATGTTAAGGCTAAAATCCAGGACAAAGAGGGAATCCCCCCAGATCAG 51006938 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||| | || |||||||| |||||| | || ||| |||||| | |||||||||||| Sbjct 51006939 CAGCGTTTGATCTTTGCCGGAAAACAGCTTGAAGATGGCCGCACTCTGTCCGATTACAAC 51006998 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 || || ||||| ||||| | ||| Sbjct 51006999 ATCCAGAAAGAGTCCACGAAACA 51007021 Score = 100 bits (110), Expect = 2e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| ||||| | || |||||||| ||||||| || || || Sbjct 51001753 GATGCAGATCTTTGTGAAAACACTCACTGGTAAAACCATCACTCTAGATGTAGATGAAGA 51001812 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||| | | || | | ||| | || ||||||||||||||||| || ||||| ||||| Sbjct 51001813 TGATAGCATAGAGAACGTGAAAAAGAAGATTCAAGACAAGGAGGGAATACCACCTGATCA 51001872 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCA-CCGCACCGTCTCCGATTACA 22396 ||||| | || |||||||| |||||| | ||||| | | ||| | | | ||| | Sbjct 51001873 GCAACGCTTGATTTTTGCCGGGAAACAGCTCGAGGACGATCGGCAAC-TGAAAGCTTATA 51001931 Query 22397 ACATTCAAAAAGAATCCAC 22415 |||| |||||||| || || Sbjct 51001932 ACATACAAAAAGAGTCAAC 51001950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419702223323035